2F4I | pdb_00002f4i

Crystal structure of an ob-fold protein (tm0957) from thermotoga maritima msb8 at 1.90 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d2f4id_	All beta proteins	OB-fold	TM0957-like	TM0957-like	Hypothetical protein TM0957	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
C	d2f4ic_	All beta proteins	OB-fold	TM0957-like	TM0957-like	Hypothetical protein TM0957	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
B	d2f4ib_	All beta proteins	OB-fold	TM0957-like	TM0957-like	Hypothetical protein TM0957	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)
A	d2f4ia1	All beta proteins	OB-fold	TM0957-like	TM0957-like	Hypothetical protein TM0957	(Thermotoga maritima MSB8 ) [TaxId: 243274 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	TM0957-like	8040562	3000409	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	TM0957-like	8040562	3000409	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	TM0957-like	8040562	3000409	SCOP2B (2022-06-29)
A	SCOP2 Family	TM0957-like	8028183	4001804	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	TM0957-like	8040562	3000409	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	DUF2291	e2f4iD1	A: beta barrels	X: OB-fold	H: TM0957-like (From Topology)	T: TM0957-like	F: DUF2291	ECOD (1.6)
C	DUF2291	e2f4iC1	A: beta barrels	X: OB-fold	H: TM0957-like (From Topology)	T: TM0957-like	F: DUF2291	ECOD (1.6)
B	DUF2291	e2f4iB1	A: beta barrels	X: OB-fold	H: TM0957-like (From Topology)	T: TM0957-like	F: DUF2291	ECOD (1.6)
A	DUF2291	e2f4iA1	A: beta barrels	X: OB-fold	H: TM0957-like (From Topology)	T: TM0957-like	F: DUF2291	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	1.10.10.1260	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Envelope glycoprotein gp160, DUF2291, helical domain	CATH (4.3.0)
D	2.40.50.420	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Envelope glycoprotein gp160, DUF2291, alpha/beta domain	CATH (4.3.0)
C	1.10.10.1260	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Envelope glycoprotein gp160, DUF2291, helical domain	CATH (4.3.0)
C	2.40.50.420	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Envelope glycoprotein gp160, DUF2291, alpha/beta domain	CATH (4.3.0)
B	1.10.10.1260	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Envelope glycoprotein gp160, DUF2291, helical domain	CATH (4.3.0)
B	2.40.50.420	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Envelope glycoprotein gp160, DUF2291, alpha/beta domain	CATH (4.3.0)
A	1.10.10.1260	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Envelope glycoprotein gp160, DUF2291, helical domain	CATH (4.3.0)
A	2.40.50.420	Mainly Beta	Beta Barrel	OB fold (Dihydrolipoamide Acetyltransferase, E2P)	Envelope glycoprotein gp160, DUF2291, alpha/beta domain	CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR036215	TM0957-like superfamily	Homologous Superfamily
A, B, C, D	IPR014582	Uncharacterised conserved protein UCP033535, periplasmic lipoprotein	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B, C, D	MLY	Parent Component: LYS RESID: AA0075 PSI-MOD : N6,N6-dimethyl-L-lysine MOD:00084
A, B, C, D	MSE	Parent Component: MET RESID: AA0075

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.