2F1M
Conformational flexibility in the multidrug efflux system protein AcrA
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d2f1ma_ | Membrane and cell surface proteins and peptides | HlyD-like secretion proteins | HlyD-like secretion proteins | automated matches | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
B | d2f1mb_ | Membrane and cell surface proteins and peptides | HlyD-like secretion proteins | HlyD-like secretion proteins | automated matches | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
C | d2f1mc_ | Membrane and cell surface proteins and peptides | HlyD-like secretion proteins | HlyD-like secretion proteins | automated matches | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
D | d2f1md_ | Membrane and cell surface proteins and peptides | HlyD-like secretion proteins | HlyD-like secretion proteins | automated matches | automated matches | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e2f1mA4 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: F_UNCLASSIFIED | ECOD (1.6) |
A | F_UNCLASSIFIED | e2f1mA5 | A: alpha bundles | X: helical hairpin of HlyD-like secretion proteins (From Topology) | H: helical hairpin of HlyD-like secretion proteins (From Topology) | T: helical hairpin of HlyD-like secretion proteins | F: F_UNCLASSIFIED | ECOD (1.6) |
A | F_UNCLASSIFIED | e2f1mA6 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Single hybrid motif | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e2f1mB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e2f1mB3 | A: alpha bundles | X: helical hairpin of HlyD-like secretion proteins (From Topology) | H: helical hairpin of HlyD-like secretion proteins (From Topology) | T: helical hairpin of HlyD-like secretion proteins | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e2f1mB2 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Single hybrid motif | F: F_UNCLASSIFIED | ECOD (1.6) |
C | F_UNCLASSIFIED | e2f1mC3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: F_UNCLASSIFIED | ECOD (1.6) |
C | F_UNCLASSIFIED | e2f1mC2 | A: alpha bundles | X: helical hairpin of HlyD-like secretion proteins (From Topology) | H: helical hairpin of HlyD-like secretion proteins (From Topology) | T: helical hairpin of HlyD-like secretion proteins | F: F_UNCLASSIFIED | ECOD (1.6) |
C | F_UNCLASSIFIED | e2f1mC1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Single hybrid motif | F: F_UNCLASSIFIED | ECOD (1.6) |
D | F_UNCLASSIFIED | e2f1mD2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: F_UNCLASSIFIED | ECOD (1.6) |
D | F_UNCLASSIFIED | e2f1mD1 | A: alpha bundles | X: helical hairpin of HlyD-like secretion proteins (From Topology) | H: helical hairpin of HlyD-like secretion proteins (From Topology) | T: helical hairpin of HlyD-like secretion proteins | F: F_UNCLASSIFIED | ECOD (1.6) |
D | F_UNCLASSIFIED | e2f1mD3 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Single hybrid motif | F: F_UNCLASSIFIED | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00529 | Cation efflux system protein CusB domain 1 (CusB_dom_1) | Cation efflux system protein CusB domain 1 | - | Family | |
PF16576 | Barrel-sandwich domain of CusB or HlyD membrane-fusion (HlyD_D23) | Barrel-sandwich domain of CusB or HlyD membrane-fusion | HlyD_D23 is the combined domains 2 and 3 of the membrane-fusion proteins CusB and HlyD, which forms a barrel-sandwich. CusB and HlyD proteins are membrane fusion proteins of the CusCFBA copper efflux system in E.coli and related bacteria. The whole ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Multi-Drug Efflux Transporters | AcrA fusion protein |