2EAD
Crystal structure of 1,2-a-L-fucosidase from Bifidobacterium bifidum in complex with substrate
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Glyco_hyd_65N_2 | e2eadA3 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: Glyco_hyd_65N_2 | ECOD (1.6) |
A | Glyco_hydro_95_C | e2eadA2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycoside hydrolase family 127 middle domain-related (From Topology) | T: Glycoside hydrolase family 127 middle domain-related | F: Glyco_hydro_95_C | ECOD (1.6) |
A | Glyco_hydro_65m | e2eadA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: Glyco_hydro_65m | ECOD (1.6) |
B | Glyco_hyd_65N_2 | e2eadB2 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: supersandwich (From Topology) | T: supersandwich | F: Glyco_hyd_65N_2 | ECOD (1.6) |
B | Glyco_hydro_95_C | e2eadB1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Glycoside hydrolase family 127 middle domain-related (From Topology) | T: Glycoside hydrolase family 127 middle domain-related | F: Glyco_hydro_95_C | ECOD (1.6) |
B | Glyco_hydro_65m | e2eadB3 | A: alpha superhelices | X: Repetitive alpha hairpins | H: alpha/alpha toroid (From Topology) | T: alpha/alpha toroid | F: Glyco_hydro_65m | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.70.98.50 | Mainly Beta | Distorted Sandwich | Beta-galactosidase | Chain A, domain 5 | CATH (4.3.0) |
A | 1.50.10.10 | Mainly Alpha | Alpha/alpha barrel | Glycosyltransferase | CATH (4.3.0) | |
A | 2.60.40.1180 | Mainly Beta | Sandwich | Immunoglobulin-like | Golgi alpha-mannosidase II | CATH (4.3.0) |
B | 2.70.98.50 | Mainly Beta | Distorted Sandwich | Beta-galactosidase | Chain A, domain 5 | CATH (4.3.0) |
B | 1.50.10.10 | Mainly Alpha | Alpha/alpha barrel | Glycosyltransferase | CATH (4.3.0) | |
B | 2.60.40.1180 | Mainly Beta | Sandwich | Immunoglobulin-like | Golgi alpha-mannosidase II | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22124 | Glycosyl hydrolase family 95 catalytic domain (Glyco_hydro_95_cat) | Glycosyl hydrolase family 95 catalytic domain | The founding member of the GH95 family of glycosyl hydrolases is alpha-1,2-fucosidase that catalyses the hydrolysis of an alpha-1,2-linked fucose. A member of this family, FucOB from A. muciniphila was shown to hydrolyse all three types of H antigen ... | Domain | |
PF21307 | Glycoside hydrolase family 95, C-terminal domain (Glyco_hydro_95_C) | Glycoside hydrolase family 95, C-terminal domain | This domain is found in Alpha-fucosidase from Bifidobacterium bifidum (AfcA) and in other members of the glycoside hydrolase family 95 from bacteria and plants. AfcA hydrolyses the glycosidic linkage of Fuc1-2Gal via an inverting mechanism. This entr ... | Domain | |
PF14498 | Glycosyl hydrolase family 65, N-terminal domain (Glyco_hyd_65N_2) | Glycosyl hydrolase family 65, N-terminal domain | This domain represents a domain found to the N-terminus of the glycosyl hydrolase 65 family catalytic domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Alpha-fucosidase |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR012341 | Six-hairpin glycosidase-like superfamily | Homologous Superfamily | |
IPR049053 | Alpha fucosidase A-like, C-terminal domain | Domain | |
IPR008928 | Six-hairpin glycosidase superfamily | Homologous Superfamily | |
IPR027414 | Glycosyl hydrolase family 95, N-terminal domain | Domain | |
IPR022038 | Ig-like domain, bacterial type | Domain | |
IPR003343 | Bacterial Ig-like domain, group 2 | Domain | |
IPR008964 | Invasin/intimin cell-adhesion fragments | Homologous Superfamily |