2DYD

Solution structure of the PABC domain from Triticum aevestium poly(A)-binding protein

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2dyda1	All alpha proteins	PABP domain-like	PABC (PABP) domain	automated matches	automated matches	bread wheat (Triticum aestivum ) [TaxId: 4565 ],	SCOPe (2.08)
A	d2dyda2	Artifacts	Tags	Tags	Tags	N-terminal Tags	bread wheat (Triticum aestivum ) [TaxId: 4565 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	PABC (PABP) domain	8068215	4003044	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	PABC (PABP) domain	8068216	3000200	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00658	e2dydA2	A: alpha arrays	X: PABP domain-like	H: PABC(PABP) domain (From Topology)	T: PABC(PABP) domain	F: PF00658	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.1900.10	Mainly Alpha	Orthogonal Bundle	c-terminal domain of poly(a) binding protein	c-terminal domain of poly(a) binding protein	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00658	Poly-adenylate binding protein, unique domain (PABP)	Poly-adenylate binding protein, unique domain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Poly(A)-binding protein	RNA binding binding organic cyclic compound binding nucleic acid binding	-	intracellular anatomical structure cytoplasm cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
A	IPR002004	Polyadenylate-binding protein/Hyperplastic disc protein	Domain
A	IPR003954	RNA recognition motif domain, eukaryote	Domain
A	IPR000504	RNA recognition motif domain	Domain
A	IPR006515	Polyadenylate binding protein, human types 1, 2, 3, 4	Family
A	IPR036053	PABC (PABP) domain	Homologous Superfamily
A	IPR034364	PABP, RNA recognition motif 1	Domain
A	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
A	IPR045305	PABP, RNA recognition motif 2	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.