2DXB | pdb_00002dxb

Recombinant thiocyanate hydrolase comprising partially-modified cobalt centers

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	Nitrile hydratase alpha chain	8077353	3000945	SCOP2B (2022-06-29)
X	SCOP2B Superfamily	Nitrile hydratase alpha chain	8077353	3000945	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Nitrile hydratase alpha chain	8077353	3000945	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Nitrile hydratase alpha chain	8077353	3000945	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Nitrile hydratase alpha chain	8077353	3000945	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Nitrile hydratase alpha chain	8077353	3000945	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Nitrile hydratase alpha chain	8077353	3000945	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Nitrile hydratase alpha chain	8077353	3000945	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	NHase_alpha	e2dxbF1	A: a+b complex topology	X: Nitrile hydratase alpha chain (From Topology)	H: Nitrile hydratase alpha chain (From Topology)	T: Nitrile hydratase alpha chain	F: NHase_alpha	ECOD (1.6)
X	NHase_alpha	e2dxbX1	A: a+b complex topology	X: Nitrile hydratase alpha chain (From Topology)	H: Nitrile hydratase alpha chain (From Topology)	T: Nitrile hydratase alpha chain	F: NHase_alpha	ECOD (1.6)
U	NHase_alpha	e2dxbU1	A: a+b complex topology	X: Nitrile hydratase alpha chain (From Topology)	H: Nitrile hydratase alpha chain (From Topology)	T: Nitrile hydratase alpha chain	F: NHase_alpha	ECOD (1.6)
R	NHase_alpha	e2dxbR1	A: a+b complex topology	X: Nitrile hydratase alpha chain (From Topology)	H: Nitrile hydratase alpha chain (From Topology)	T: Nitrile hydratase alpha chain	F: NHase_alpha	ECOD (1.6)
O	NHase_alpha	e2dxbO1	A: a+b complex topology	X: Nitrile hydratase alpha chain (From Topology)	H: Nitrile hydratase alpha chain (From Topology)	T: Nitrile hydratase alpha chain	F: NHase_alpha	ECOD (1.6)
L	NHase_alpha	e2dxbL1	A: a+b complex topology	X: Nitrile hydratase alpha chain (From Topology)	H: Nitrile hydratase alpha chain (From Topology)	T: Nitrile hydratase alpha chain	F: NHase_alpha	ECOD (1.6)
I	NHase_alpha	e2dxbI1	A: a+b complex topology	X: Nitrile hydratase alpha chain (From Topology)	H: Nitrile hydratase alpha chain (From Topology)	T: Nitrile hydratase alpha chain	F: NHase_alpha	ECOD (1.6)
C	NHase_alpha	e2dxbC1	A: a+b complex topology	X: Nitrile hydratase alpha chain (From Topology)	H: Nitrile hydratase alpha chain (From Topology)	T: Nitrile hydratase alpha chain	F: NHase_alpha	ECOD (1.6)
K	NHase_beta_N	e2dxbK1	A: alpha arrays	X: Nitrile hydratase subunit beta N-termial domain (From Topology)	H: Nitrile hydratase subunit beta N-termial domain (From Topology)	T: Nitrile hydratase subunit beta N-termial domain	F: NHase_beta_N	ECOD (1.6)
W	NHase_beta_N	e2dxbW1	A: alpha arrays	X: Nitrile hydratase subunit beta N-termial domain (From Topology)	H: Nitrile hydratase subunit beta N-termial domain (From Topology)	T: Nitrile hydratase subunit beta N-termial domain	F: NHase_beta_N	ECOD (1.6)
T	NHase_beta_N	e2dxbT1	A: alpha arrays	X: Nitrile hydratase subunit beta N-termial domain (From Topology)	H: Nitrile hydratase subunit beta N-termial domain (From Topology)	T: Nitrile hydratase subunit beta N-termial domain	F: NHase_beta_N	ECOD (1.6)
Q	NHase_beta_N	e2dxbQ1	A: alpha arrays	X: Nitrile hydratase subunit beta N-termial domain (From Topology)	H: Nitrile hydratase subunit beta N-termial domain (From Topology)	T: Nitrile hydratase subunit beta N-termial domain	F: NHase_beta_N	ECOD (1.6)
N	NHase_beta_N	e2dxbN1	A: alpha arrays	X: Nitrile hydratase subunit beta N-termial domain (From Topology)	H: Nitrile hydratase subunit beta N-termial domain (From Topology)	T: Nitrile hydratase subunit beta N-termial domain	F: NHase_beta_N	ECOD (1.6)
H	NHase_beta_N	e2dxbH1	A: alpha arrays	X: Nitrile hydratase subunit beta N-termial domain (From Topology)	H: Nitrile hydratase subunit beta N-termial domain (From Topology)	T: Nitrile hydratase subunit beta N-termial domain	F: NHase_beta_N	ECOD (1.6)
E	NHase_beta_N	e2dxbE1	A: alpha arrays	X: Nitrile hydratase subunit beta N-termial domain (From Topology)	H: Nitrile hydratase subunit beta N-termial domain (From Topology)	T: Nitrile hydratase subunit beta N-termial domain	F: NHase_beta_N	ECOD (1.6)
B	NHase_beta_N	e2dxbB1	A: alpha arrays	X: Nitrile hydratase subunit beta N-termial domain (From Topology)	H: Nitrile hydratase subunit beta N-termial domain (From Topology)	T: Nitrile hydratase subunit beta N-termial domain	F: NHase_beta_N	ECOD (1.6)
D	NHase_beta_C	e2dxbD1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: NHase_beta_C	ECOD (1.6)
S	NHase_beta_C	e2dxbS1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: NHase_beta_C	ECOD (1.6)
V	NHase_beta_C	e2dxbV1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: NHase_beta_C	ECOD (1.6)
P	NHase_beta_C	e2dxbP1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: NHase_beta_C	ECOD (1.6)
M	NHase_beta_C	e2dxbM1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: NHase_beta_C	ECOD (1.6)
J	NHase_beta_C	e2dxbJ1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: NHase_beta_C	ECOD (1.6)
G	NHase_beta_C	e2dxbG1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: NHase_beta_C	ECOD (1.6)
A	NHase_beta_C	e2dxbA1	A: beta barrels	X: SH3	H: SH3	T: SH3	F: NHase_beta_C	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.2.0)
X	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.2.0)
U	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.2.0)
R	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.2.0)
O	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.2.0)
L	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.2.0)
I	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.2.0)
C	3.90.330.10	Alpha Beta	Alpha-Beta Complex	Nitrile Hydratase	Chain A	CATH (4.2.0)
K	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.2.0)
W	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.2.0)
T	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.2.0)
Q	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.2.0)
N	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.2.0)
H	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.2.0)
E	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.2.0)
B	1.10.472.20	Mainly Alpha	Orthogonal Bundle	Cyclin A	domain 1	CATH (4.2.0)
D	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.2.0)
S	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.2.0)
V	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.2.0)
P	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.2.0)
M	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.2.0)
J	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.2.0)
G	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.2.0)
A	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (4.2.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C, F, I, L, O C, F, I, L, O, R, U, X	Thiocyanate hydrolase subunit gamma	cation binding transition metal ion binding ion binding binding metal ion binding small molecule binding thiocyanate hydrolase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles hydrolase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	cellular response to stimulus catabolic process response to stimulus thiocyanate catabolic process cellular response to xenobiotic stimulus organic acid metabolic process xenobiotic catabolic process xenobiotic metabolic process response to xenobiotic stimulus sulfur compound catabolic process cellular response to chemical stimulus thiocyanate metabolic process response to chemical small molecule metabolic process cellular response to stimulus catabolic process response to stimulus thiocyanate catabolic process cellular response to xenobiotic stimulus organic acid metabolic process xenobiotic catabolic process xenobiotic metabolic process response to xenobiotic stimulus sulfur compound catabolic process cellular response to chemical stimulus thiocyanate metabolic process response to chemical small molecule metabolic process metabolic process cellular process sulfur compound metabolic process small molecule catabolic process	-
B, E, H, K, N B, E, H, K, N, Q, T, W	Thiocyanate hydrolase subunit beta	thiocyanate hydrolase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles hydrolase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	cellular response to stimulus catabolic process response to stimulus thiocyanate catabolic process cellular response to xenobiotic stimulus organic acid metabolic process xenobiotic catabolic process xenobiotic metabolic process response to xenobiotic stimulus sulfur compound catabolic process cellular response to chemical stimulus thiocyanate metabolic process response to chemical small molecule metabolic process cellular response to stimulus catabolic process response to stimulus thiocyanate catabolic process cellular response to xenobiotic stimulus organic acid metabolic process xenobiotic catabolic process xenobiotic metabolic process response to xenobiotic stimulus sulfur compound catabolic process cellular response to chemical stimulus thiocyanate metabolic process response to chemical small molecule metabolic process metabolic process cellular process sulfur compound metabolic process small molecule catabolic process	-
A, D, G, J, M A, D, G, J, M, P, S, V	Thiocyanate hydrolase subunit alpha	thiocyanate hydrolase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles hydrolase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	cellular response to stimulus catabolic process response to stimulus thiocyanate catabolic process cellular response to xenobiotic stimulus organic acid metabolic process xenobiotic catabolic process xenobiotic metabolic process response to xenobiotic stimulus sulfur compound catabolic process cellular response to chemical stimulus thiocyanate metabolic process response to chemical small molecule metabolic process cellular response to stimulus catabolic process response to stimulus thiocyanate catabolic process cellular response to xenobiotic stimulus organic acid metabolic process xenobiotic catabolic process xenobiotic metabolic process response to xenobiotic stimulus sulfur compound catabolic process cellular response to chemical stimulus thiocyanate metabolic process response to chemical small molecule metabolic process metabolic process cellular process sulfur compound metabolic process small molecule catabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C, F, I, L, O C, F, I, L, O, R, U, X	IPR004232	Nitrile hydratase alpha/Thiocyanate hydrolase gamma	Domain
C, F, I, L, O C, F, I, L, O, R, U, X	IPR036648	Nitrile hydratase alpha /Thiocyanate hydrolase gamma superfamily	Homologous Superfamily
C, F, I, L, O C, F, I, L, O, R, U, X	IPR023900	Nitrile hydratase alpha subunit /Thiocyanate hydrolase gamma subunit	Family
C, F, I, L, O C, F, I, L, O, R, U, X	IPR023901	Thiocyanate hydrolase, gamma subunit	Family
B, E, H, K, N B, E, H, K, N, Q, T, W	IPR049054	Nitrile hydratase beta subunit-like, N-terminal domain	Domain
B, E, H, K, N B, E, H, K, N, Q, T, W	IPR008990	Electron transport accessory-like domain superfamily	Homologous Superfamily
B, E, H, K, N B, E, H, K, N, Q, T, W	IPR042262	Nitrile hydratase beta subunit, N-terminal	Homologous Superfamily
A, D, G, J, M A, D, G, J, M, P, S, V	IPR008990	Electron transport accessory-like domain superfamily	Homologous Superfamily
A, D, G, J, M A, D, G, J, M, P, S, V	IPR024690	Nitrile hydratase beta subunit domain	Domain

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
C, F, I, L, O C, F, I, L, O, R, U, X	CSD	Parent Component: CYS RESID: AA0262 PSI-MOD : L-cysteine sulfinic acid MOD:00267
C, F, I, L, O C, F, I, L, O, R, U, X	CSO	Parent Component: CYS RESID: AA0262 , AA0205 PSI-MOD : L-cysteine sulfinic acid MOD:00267 , L-cysteine sulfenic acid MOD:00210

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Recombinant thiocyanate hydrolase comprising partially-modified cobalt centers

External Resource: Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Domain Annotation: CATH CATH Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Protein Modification Annotation

2DXB | pdb_00002dxb