2DT7
Solution structure of the second SURP domain of human splicing factor SF3a120 in complex with a fragment of human splicing factor SF3a60
Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d2dt7b1 | All alpha proteins | Surp module (SWAP domain) | Surp module (SWAP domain) | Surp module (SWAP domain) | Splicing factor 3 subunit 1, SF3A1 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d2dt7b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 1.10.10.790 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | Surp module | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12108 | Splicing factor SF3a60 binding domain (SF3a60_bindingd) | Splicing factor SF3a60 binding domain | This domain is found in eukaryotes. This domain is about 30 amino acids in length. This domain has a single completely conserved residue Y that may be functionally important. SF3a60 makes up the SF3a complex with SF3a66 and SF3a120. This domain is th ... | Domain | |
PF01805 | Surp module (Surp) | Surp module | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR021966 | Splicing factor SF3a60 binding domain | Domain | |
IPR031774 | SF3A3 domain | Domain | |
IPR024598 | Splicing factor SF3a60 /Prp9 subunit, C-terminal | Domain | |
IPR000690 | Matrin/U1-C, C2H2-type zinc finger | Domain | |
IPR025086 | SDE2-like, C-terminal domain | Domain | |
IPR045146 | Splicing factor 3A subunit 1 | Family | |
IPR035967 | SWAP/Surp superfamily | Homologous Superfamily | |
IPR000061 | SWAP/Surp | Domain | |
IPR000626 | Ubiquitin-like domain | Domain | |
IPR035563 | Splicing factor 3A subunit 1, ubiquitin domain | Domain | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily | |
IPR022030 | Splicing factor 3A subunit 1, conserved domain | Domain |