Crystal structure of human peptidylarginine deiminase 4 in complex with histone H3 N-terminal peptide including Arg17
External Resource: Annotation
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
A [auth X] | d2dexx1 | All beta proteins | Common fold of diphtheria toxin/transcription factors/cytochrome f | Peptidylarginine deiminase Pad4, middle domain | Peptidylarginine deiminase Pad4, middle domain | Peptidylarginine deiminase Pad4, middle domain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A [auth X] | d2dexx2 | All beta proteins | Cupredoxin-like | Cupredoxins | Peptidylarginine deiminase Pad4, N-terminal domain | Peptidylarginine deiminase Pad4, N-terminal domain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
A [auth X] | d2dexx3 | Alpha and beta proteins (a+b) | Pentein, beta/alpha-propeller | Pentein | Peptidylarginine deiminase Pad4, catalytic C-terminal domain | Peptidylarginine deiminase Pad4, catalytic C-terminal domain | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
A [auth X] | SCOP2B Superfamily | Peptidylarginine deiminase Pad4 middle domain | 8039684 | 3000247 | SCOP2B (2022-06-29) |
A [auth X] | SCOP2B Superfamily | Pentein | 8039686 | 3000640 | SCOP2B (2022-06-29) |
A [auth X] | SCOP2B Superfamily | Cupredoxins | 8039685 | 3000886 | SCOP2B (2022-06-29) |
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
A [auth X] | PF08527 | e2dexX2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF08527 | ECOD (1.6) |
A [auth X] | PF08526 | e2dexX1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: PF08526 | ECOD (1.6) |
A [auth X] | PF03068 | e2dexX3 | A: a+b duplicates or obligate multimers | X: Pentein (From Topology) | H: Pentein (From Topology) | T: Pentein | F: PF03068 | ECOD (1.6) |
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
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A [auth X] | Protein-arginine deiminase type IV | | | |
B [auth A] | 10-mer peptide from histone H3 | - | - | - |