2D8N | pdb_00002d8n

Crystal structure of human recoverin at 2.2 A resolution

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2d8na_	All alpha proteins	EF Hand-like	EF-hand	Calmodulin-like	automated matches	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Calmodulin-like	8078468	4000924	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	EF-hand	8078469	3001983	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e2d8nA5	A: Subtilisin-like	X: Subtilisin-like	H: Subtilisin-like	T: EF-hand_1, EF-hand_5, EF-hand_7	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.238.10	Mainly Alpha	Orthogonal Bundle	Recoverin	domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF13833	EF-hand domain pair (EF-hand_8)	EF-hand domain pair		Domain
A	PF13499	EF-hand domain pair (EF-hand_7)	EF-hand domain pair		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Recoverin	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding enzyme regulator activity cyclase regulator activity enzyme activator activity cyclase activator activity molecular function activator activity calcium sensitive guanylate cyclase activator activity guanylate cyclase activator activity molecular function regulator activity cation binding ion binding binding calcium ion binding metal ion binding small molecule binding enzyme regulator activity cyclase regulator activity enzyme activator activity cyclase activator activity molecular function activator activity calcium sensitive guanylate cyclase activator activity guanylate cyclase activator activity molecular function regulator activity guanylate cyclase regulator activity	regulation of calcium ion transport regulation of localization regulation of biological process transport regulation of transport regulation of monoatomic ion transport biological regulation establishment of localization metal ion transport calcium ion transport localization monoatomic ion transport regulation of metal ion transport monoatomic cation transport regulation of calcium ion transport regulation of localization regulation of biological process transport regulation of transport regulation of monoatomic ion transport biological regulation establishment of localization metal ion transport calcium ion transport localization monoatomic ion transport regulation of metal ion transport monoatomic cation transport cellular response to stimulus regulation of signaling regulation of cellular process response to stimulus signaling regulation of signal transduction cell communication regulation of response to stimulus regulation of cell communication cellular process signal transduction multicellular organismal process sensory perception of light stimulus system process sensory perception nervous system process visual perception phototransduction detection of light stimulus response to light stimulus detection of external stimulus response to external stimulus detection of abiotic stimulus detection of stimulus response to abiotic stimulus response to radiation	somatodendritic compartment cell body cellular anatomical structure perikaryon neuronal cell body photoreceptor inner segment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection membrane-bounded organelle non-motile cilium 9+0 non-motile cilium somatodendritic compartment cell body cellular anatomical structure perikaryon neuronal cell body photoreceptor inner segment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection membrane-bounded organelle non-motile cilium 9+0 non-motile cilium cilium photoreceptor outer segment photoreceptor cell cilium organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR028846	Recoverin family	Family
A	IPR018247	EF-Hand 1, calcium-binding site	Binding Site
A	IPR002048	EF-hand domain	Domain
A	IPR011992	EF-hand domain pair	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: P35243	open-angle glaucoma retinal degeneration

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.