2CS8 | pdb_00002cs8

Solution structure of tandem repeat of the fifth and sixth zinc-finger C2HC domains from human ST18

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	zf-C2HC	e2cs8A1	A: few secondary structure elements	X: CCHHC domain (From Topology)	H: CCHHC domain (From Topology)	T: CCHHC domain	F: zf-C2HC	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	4.10.320.30	Few Secondary Structures	Irregular	Dihydrolipoamide Transferase		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF01530	Zinc finger, C2HC type (zf-C2HC)	Zinc finger, C2HC type	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	KIAA0535 protein	DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific transcription regulator activity DNA-binding transcription factor activity DNA binding sequence-specific DNA binding binding double-stranded DNA binding nucleic acid binding RNA polymerase II transcription regulatory region sequence-specific DNA binding cis-regulatory region sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding transcription regulatory region nucleic acid binding RNA polymerase II cis-regulatory region sequence-specific DNA binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	interleukin-6-mediated signaling pathway cellular response to stimulus regulation of biological process response to interleukin-6 regulation of cellular process response to stimulus cell surface receptor signaling pathway signaling cellular response to interleukin-6 biological regulation response to cytokine cytokine-mediated signaling pathway cell communication response to peptide response to chemical interleukin-6-mediated signaling pathway cellular response to stimulus regulation of biological process response to interleukin-6 regulation of cellular process response to stimulus cell surface receptor signaling pathway signaling cellular response to interleukin-6 biological regulation response to cytokine cytokine-mediated signaling pathway cell communication response to peptide response to chemical cellular response to cytokine stimulus cellular process signal transduction negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation negative regulation of cellular process negative regulation of biological process cellular response to tumor necrosis factor tumor necrosis factor-mediated signaling pathway response to tumor necrosis factor regulation of biosynthetic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process cellular response to interleukin-1 interleukin-1-mediated signaling pathway response to interleukin-1 positive regulation of DNA-templated transcription positive regulation of biological process RNA metabolic process positive regulation of macromolecule biosynthetic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process positive regulation of metabolic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II positive regulation of biosynthetic process positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process positive regulation of cellular process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II primary metabolic process positive regulation of transcription by RNA polymerase II nucleobase-containing compound biosynthetic process nucleic acid metabolic process positive regulation of RNA metabolic process positive regulation of RNA biosynthetic process regulation of DNA-templated transcription	protein-containing complex protein-DNA complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle chromatin chromosome membrane-bounded organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR036060	Zinc finger, C2H2C-type superfamily	Homologous Superfamily
A	IPR002515	Zinc finger, C2H2C-type	Repeat
A	IPR013681	Myelin transcription factor 1	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: O60284	Alcohol Use Disorder astrocytic tumor glioblastoma malignant ependymoma medulloblastoma pituitary cancer subependymal giant cell astrocytoma atypical teratoid rhabdoid tumor lung cancer malignant glioma oligodendroglioma progressive supranuclear palsy Alzheimer disease Down syndrome lung carcinoma Alcohol Use Disorder astrocytic tumor glioblastoma malignant ependymoma medulloblastoma pituitary cancer subependymal giant cell astrocytoma atypical teratoid rhabdoid tumor lung cancer malignant glioma oligodendroglioma progressive supranuclear palsy Alzheimer disease Down syndrome lung carcinoma malignant mesothelioma pilocytic astrocytoma Sjogren syndrome

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.