2CPW | pdb_00002cpw

Solution structure of RSGI RUH-031, a UBA domain from human cDNA

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d2cpwa1	All alpha proteins	RuvA C-terminal domain-like	UBA-like	UBA domain	Cbl-interacting protein p70, STS1	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d2cpwa3	Artifacts	Tags	Tags	Tags	C-terminal Tags	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d2cpwa2	Artifacts	Tags	Tags	Tags	N-terminal Tags	human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	UBA domain	8026807	4000749	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	UBA-like	8039186	3001235	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	UBA	e2cpwA1	A: alpha arrays	X: RuvA-C	H: RuvA-C, UBA, CRAL/TRIO-N, HBS1 (From Topology)	T: RuvA-C, UBA, CRAL/TRIO-N, HBS1	F: UBA	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF22562	UBA-like domain (UBA_7)	UBA-like domain	This entry represents a UBA domain.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Cbl-interacting protein Sts-1 variant	phosphoprotein binding protein binding binding ubiquitin protein ligase binding ubiquitin-like protein ligase binding enzyme binding phosphoric ester hydrolase activity phosphoprotein phosphatase activity catalytic activity, acting on a protein hydrolase activity, acting on ester bonds protein tyrosine phosphatase activity phosphatase activity hydrolase activity catalytic activity phosphoprotein binding protein binding binding ubiquitin protein ligase binding ubiquitin-like protein ligase binding enzyme binding phosphoric ester hydrolase activity phosphoprotein phosphatase activity catalytic activity, acting on a protein hydrolase activity, acting on ester bonds protein tyrosine phosphatase activity phosphatase activity hydrolase activity catalytic activity identical protein binding	cellular response to stimulus regulation of signaling regulation of biological process regulation of cellular process response to stimulus negative regulation of signaling signaling negative regulation of response to stimulus biological regulation negative regulation of biological process regulation of signal transduction negative regulation of signal transduction negative regulation of cell communication cell communication regulation of response to stimulus cellular response to stimulus regulation of signaling regulation of biological process regulation of cellular process response to stimulus negative regulation of signaling signaling negative regulation of response to stimulus biological regulation negative regulation of biological process regulation of signal transduction negative regulation of signal transduction negative regulation of cell communication cell communication regulation of response to stimulus negative regulation of cellular process regulation of cell communication cellular process signal transduction multicellular organismal process negative regulation of tissue remodeling homeostatic process negative regulation of bone remodeling regulation of bone remodeling tissue homeostasis regulation of tissue remodeling regulation of bone resorption bone resorption negative regulation of bone resorption multicellular organismal-level homeostasis tissue remodeling bone remodeling anatomical structure homeostasis regulation of multicellular organismal process negative regulation of multicellular organismal process myeloid leukocyte differentiation regulation of leukocyte differentiation cellular developmental process regulation of developmental process cell development regulation of cell differentiation regulation of cell development regulation of osteoclast differentiation multicellular organism development cell differentiation osteoclast differentiation anatomical structure development regulation of immune system process developmental process regulation of multicellular organismal development hemopoiesis regulation of myeloid cell differentiation regulation of myeloid leukocyte differentiation myeloid cell differentiation immune system process regulation of hemopoiesis leukocyte differentiation collagen-activated tyrosine kinase receptor signaling pathway cell surface receptor signaling pathway cell surface receptor protein tyrosine kinase signaling pathway collagen-activated signaling pathway enzyme-linked receptor protein signaling pathway regulation of body fluid levels regulation of cell activation negative regulation of cell adhesion negative regulation of platelet activation regulation of coagulation regulation of biological quality response to wounding negative regulation of homotypic cell-cell adhesion negative regulation of wound healing negative regulation of blood coagulation response to external stimulus blood coagulation negative regulation of hemostasis regulation of platelet activation negative regulation of response to external stimulus negative regulation of cell-cell adhesion regulation of wound healing platelet activation regulation of response to external stimulus homotypic cell-cell adhesion regulation of response to wounding cell adhesion cell-cell adhesion response to stress regulation of response to stress coagulation regulation of cell-cell adhesion regulation of hemostasis wound healing regulation of homotypic cell-cell adhesion regulation of cell adhesion regulation of blood coagulation hemostasis cell activation negative regulation of platelet aggregation negative regulation of response to wounding platelet aggregation negative regulation of cell activation regulation of platelet aggregation negative regulation of coagulation regulation of calcium ion transport regulation of localization cellular localization inorganic ion homeostasis intracellular calcium ion homeostasis transport monoatomic ion transmembrane transport calcium ion homeostasis regulation of monoatomic ion transmembrane transport negative regulation of sequestering of calcium ion calcium ion transport metal ion transport maintenance of location in cell regulation of calcium ion transmembrane transport monoatomic cation transmembrane transport localization intracellular monoatomic cation homeostasis monoatomic ion homeostasis monoatomic ion transport intracellular chemical homeostasis monoatomic cation homeostasis monoatomic cation transport regulation of metal ion transport regulation of sequestering of calcium ion intracellular monoatomic ion homeostasis calcium ion transmembrane import into cytosol regulation of transport regulation of release of sequestered calcium ion into cytosol sequestering of calcium ion regulation of monoatomic ion transport establishment of localization maintenance of location transmembrane transport release of sequestered calcium ion into cytosol regulation of transmembrane transport cellular homeostasis chemical homeostasis regulation of monoatomic cation transmembrane transport calcium ion transmembrane transport negative regulation of cell differentiation negative regulation of hemopoiesis negative regulation of leukocyte differentiation negative regulation of developmental process negative regulation of myeloid cell differentiation negative regulation of osteoclast differentiation negative regulation of myeloid leukocyte differentiation negative regulation of cell development negative regulation of immune system process	cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR013078	Histidine phosphatase superfamily, clade-1	Family
A	IPR051710	Phosphatase and SH3 domain-containing protein	Family
A	IPR029033	Histidine phosphatase superfamily	Homologous Superfamily
A	IPR001452	SH3 domain	Domain
A	IPR036028	SH3-like domain superfamily	Homologous Superfamily
A	IPR009060	UBA-like superfamily	Homologous Superfamily
A	IPR015940	Ubiquitin-associated domain	Domain
A	IPR035632	UBASH3B, SH3 domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A	Pharos: Q8TF42	systemic lupus erythematosus astrocytic tumor B-cell chronic lymphocytic leukemia glioblastoma lung carcinoma malignant pancreatic neoplasm oligodendroglioma rheumatoid arthritis tuberculosis atopic eczema congestive heart failure hydrolethalus syndrome malignant ependymoma medulloblastoma osteosarcoma systemic lupus erythematosus astrocytic tumor B-cell chronic lymphocytic leukemia glioblastoma lung carcinoma malignant pancreatic neoplasm oligodendroglioma rheumatoid arthritis tuberculosis atopic eczema congestive heart failure hydrolethalus syndrome malignant ependymoma medulloblastoma osteosarcoma subependymal giant cell astrocytoma atypical teratoid rhabdoid tumor cystic fibrosis large cell medulloblastoma malignant glioma non-small cell lung carcinoma pemphigus vulgaris

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.