2CF7 | pdb_00002cf7

Asp74Ala mutant crystal structure for Dps-like peroxide resistance protein Dpr from Streptococcus suis.

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d2cf7b_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Streptococcus suis ) [TaxId: 1307 ],	SCOPe (2.08)
D	d2cf7d_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Streptococcus suis ) [TaxId: 1307 ],	SCOPe (2.08)
E	d2cf7e_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Streptococcus suis ) [TaxId: 1307 ],	SCOPe (2.08)
F	d2cf7f_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Streptococcus suis ) [TaxId: 1307 ],	SCOPe (2.08)
G	d2cf7g_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Streptococcus suis ) [TaxId: 1307 ],	SCOPe (2.08)
H	d2cf7h_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Streptococcus suis ) [TaxId: 1307 ],	SCOPe (2.08)
J	d2cf7j_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Streptococcus suis ) [TaxId: 1307 ],	SCOPe (2.08)
K	d2cf7k_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Streptococcus suis ) [TaxId: 1307 ],	SCOPe (2.08)
L	d2cf7l_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Streptococcus suis ) [TaxId: 1307 ],	SCOPe (2.08)
I	d2cf7i_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Streptococcus suis ) [TaxId: 1307 ],	SCOPe (2.08)
C	d2cf7c_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Streptococcus suis ) [TaxId: 1307 ],	SCOPe (2.08)
A	d2cf7a_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	(Streptococcus suis ) [TaxId: 1307 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Ferritin-like	8041905	3001658	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ferritin-like	8041905	3001658	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Ferritin-like	8041905	3001658	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Ferritin-like	8041905	3001658	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Ferritin-like	8041905	3001658	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Ferritin-like	8041905	3001658	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Ferritin-like	8041905	3001658	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Ferritin-like	8041905	3001658	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Ferritin-like	8041905	3001658	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Ferritin-like	8041905	3001658	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ferritin-like	8041905	3001658	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Ferritin-like	8041905	3001658	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	MarR	e2cf7B1	A: alpha bundles	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (develop294)
D	MarR	e2cf7D1	A: alpha bundles	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (develop294)
E	MarR	e2cf7E1	A: alpha bundles	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (develop294)
F	MarR	e2cf7F1	A: alpha bundles	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (develop294)
G	MarR	e2cf7G1	A: alpha bundles	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (develop294)
H	MarR	e2cf7H1	A: alpha bundles	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (develop294)
J	MarR	e2cf7J1	A: alpha bundles	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (develop294)
K	MarR	e2cf7K1	A: alpha bundles	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (develop294)
L	MarR	e2cf7L1	A: alpha bundles	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (develop294)
I	MarR	e2cf7I1	A: alpha bundles	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (develop294)
C	MarR	e2cf7C1	A: alpha bundles	X: HTH	H: Nudix	T: winged helix domain	F: MarR	ECOD (develop294)
A	Fer4_13	e2cf7A2	A: alpha bundles	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: Fer4_13	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
D	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
E	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
F	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
G	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
H	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
J	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
K	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
L	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
I	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
C	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
A	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	DPR	oxidoreductase activity catalytic activity cation binding ferric iron binding transition metal ion binding iron ion binding ion binding binding metal ion binding small molecule binding	intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR012347	Ferritin-like	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR009078	Ferritin-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR002177	DNA-binding protein Dps	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR008331	Ferritin/DPS domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.