2C5Q | pdb_00002c5q

Crystal structure of yeast YER010Cp

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	RraA-like	e2c5qB1	A: a/b three-layered sandwiches	X: The swivelling beta/beta/alpha domains	H: The swivelling beta/beta/alpha domain (From Topology)	T: The swivelling beta/beta/alpha domain	F: RraA-like	ECOD (1.6)
C	RraA-like	e2c5qC1	A: a/b three-layered sandwiches	X: The swivelling beta/beta/alpha domains	H: The swivelling beta/beta/alpha domain (From Topology)	T: The swivelling beta/beta/alpha domain	F: RraA-like	ECOD (1.6)
D	RraA-like	e2c5qD1	A: a/b three-layered sandwiches	X: The swivelling beta/beta/alpha domains	H: The swivelling beta/beta/alpha domain (From Topology)	T: The swivelling beta/beta/alpha domain	F: RraA-like	ECOD (1.6)
E	RraA-like	e2c5qE1	A: a/b three-layered sandwiches	X: The swivelling beta/beta/alpha domains	H: The swivelling beta/beta/alpha domain (From Topology)	T: The swivelling beta/beta/alpha domain	F: RraA-like	ECOD (1.6)
F	RraA-like	e2c5qF1	A: a/b three-layered sandwiches	X: The swivelling beta/beta/alpha domains	H: The swivelling beta/beta/alpha domain (From Topology)	T: The swivelling beta/beta/alpha domain	F: RraA-like	ECOD (1.6)
A	RraA-like	e2c5qA1	A: a/b three-layered sandwiches	X: The swivelling beta/beta/alpha domains	H: The swivelling beta/beta/alpha domain (From Topology)	T: The swivelling beta/beta/alpha domain	F: RraA-like	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.50.30.40	Alpha Beta	3-Layer(bba) Sandwich	Glucose Oxidase	domain 1	CATH (4.2.0)
C	3.50.30.40	Alpha Beta	3-Layer(bba) Sandwich	Glucose Oxidase	domain 1	CATH (4.2.0)
D	3.50.30.40	Alpha Beta	3-Layer(bba) Sandwich	Glucose Oxidase	domain 1	CATH (4.2.0)
E	3.50.30.40	Alpha Beta	3-Layer(bba) Sandwich	Glucose Oxidase	domain 1	CATH (4.2.0)
F	3.50.30.40	Alpha Beta	3-Layer(bba) Sandwich	Glucose Oxidase	domain 1	CATH (4.2.0)
A	3.50.30.40	Alpha Beta	3-Layer(bba) Sandwich	Glucose Oxidase	domain 1	CATH (4.2.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF03737	Aldolase/RraA (RraA-like)	Aldolase/RraA	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	RRAA-LIKE PROTEIN YER010C	oxaloacetate decarboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity oxo-acid-lyase activity cation binding ion binding binding metal ion binding small molecule binding	catabolic process 3,4-dihydroxybenzoate metabolic process benzene-containing compound metabolic process oxoacid metabolic process catechol-containing compound catabolic process carboxylic acid metabolic process catechol-containing compound metabolic process organic acid metabolic process organic acid catabolic process phenol-containing compound catabolic process monocarboxylic acid catabolic process carboxylic acid catabolic process phenol-containing compound metabolic process metabolic process catabolic process 3,4-dihydroxybenzoate metabolic process benzene-containing compound metabolic process oxoacid metabolic process catechol-containing compound catabolic process carboxylic acid metabolic process catechol-containing compound metabolic process organic acid metabolic process organic acid catabolic process phenol-containing compound catabolic process monocarboxylic acid catabolic process carboxylic acid catabolic process phenol-containing compound metabolic process metabolic process cellular process small molecule metabolic process monocarboxylic acid metabolic process 3,4-dihydroxybenzoate catabolic process small molecule catabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR005493	Ribonuclease E inhibitor RraA/RraA-like protein	Family
A, B, C, D, E A, B, C, D, E, F	IPR036704	Ribonuclease E inhibitor RraA/RraA-like superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.