Combinatorial Protein 1b11
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Pup_ligase | e2bh8B1 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Pup_ligase | ECOD (develop294) |
| A | Pup_ligase | e2bh8A1 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Pup_ligase | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
| B | 6.20.370.20 | Special | Other non-globular | Rhinovirus 14, subunit 4 | CATH (4.3.0) | |
| A | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
| A | 6.20.370.20 | Special | Other non-globular | Rhinovirus 14, subunit 4 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00575 | S1 RNA binding domain (S1) | S1 RNA binding domain | The S1 domain occurs in a wide range of RNA associated proteins. It is structurally similar to cold shock protein which binds nucleic acids. The S1 domain has an OB-fold structure. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR035104 | Ribosomal protein S1-like | Family | |
| IPR003029 | S1 domain | Domain | |
| IPR050437 | Small ribosomal subunit protein bS1-like | Family | |
| IPR000110 | Small ribosomal subunit protein bS1 | Family | |
| IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily |














