2AVW | pdb_00002avw

Crystal structure of monoclinic form of streptococcus Mac-1

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F	d2avwf_	Alpha and beta proteins (a+b)	Cysteine proteinases	Cysteine proteinases	IgG-specific endopeptidase IdeS (Sib38)	automated matches	(Streptococcus pyogenes MGAS5005 ) [TaxId: 293653 ],	SCOPe (2.08)
E	d2avwe_	Alpha and beta proteins (a+b)	Cysteine proteinases	Cysteine proteinases	IgG-specific endopeptidase IdeS (Sib38)	automated matches	(Streptococcus pyogenes MGAS5005 ) [TaxId: 293653 ],	SCOPe (2.08)
D	d2avwd_	Alpha and beta proteins (a+b)	Cysteine proteinases	Cysteine proteinases	IgG-specific endopeptidase IdeS (Sib38)	automated matches	(Streptococcus pyogenes MGAS5005 ) [TaxId: 293653 ],	SCOPe (2.08)
C	d2avwc_	Alpha and beta proteins (a+b)	Cysteine proteinases	Cysteine proteinases	IgG-specific endopeptidase IdeS (Sib38)	automated matches	(Streptococcus pyogenes MGAS5005 ) [TaxId: 293653 ],	SCOPe (2.08)
B	d2avwb_	Alpha and beta proteins (a+b)	Cysteine proteinases	Cysteine proteinases	IgG-specific endopeptidase IdeS (Sib38)	automated matches	(Streptococcus pyogenes MGAS5005 ) [TaxId: 293653 ],	SCOPe (2.08)
A	d2avwa_	Alpha and beta proteins (a+b)	Cysteine proteinases	Cysteine proteinases	IgG-specific endopeptidase IdeS (Sib38)	automated matches	(Streptococcus pyogenes MGAS5005 ) [TaxId: 293653 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	Hepar_II_III	e2avwF1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: Hepar_II_III	ECOD (v294.1)
E	Hepar_II_III	e2avwE1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: Hepar_II_III	ECOD (v294.1)
D	Hepar_II_III	e2avwD1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: Hepar_II_III	ECOD (v294.1)
C	Hepar_II_III	e2avwC1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: Hepar_II_III	ECOD (v294.1)
B	Hepar_II_III	e2avwB1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: Hepar_II_III	ECOD (v294.1)
A	Hepar_II_III	e2avwA1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: Hepar_II_III	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	3.90.70.10	Alpha Beta	Alpha-Beta Complex	Cathepsin B	Chain A	CATH (4.3.0)
E	3.90.70.10	Alpha Beta	Alpha-Beta Complex	Cathepsin B	Chain A	CATH (4.3.0)
D	3.90.70.10	Alpha Beta	Alpha-Beta Complex	Cathepsin B	Chain A	CATH (4.3.0)
C	3.90.70.10	Alpha Beta	Alpha-Beta Complex	Cathepsin B	Chain A	CATH (4.3.0)
B	3.90.70.10	Alpha Beta	Alpha-Beta Complex	Cathepsin B	Chain A	CATH (4.3.0)
A	3.90.70.10	Alpha Beta	Alpha-Beta Complex	Cathepsin B	Chain A	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	IgG-degrading protease	peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity identical protein binding protein binding binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR038765	Papain-like cysteine peptidase superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR015117	Ig protease IdeS	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.