2AAL | pdb_00002aal

Crystal Structures of the Wild-type, Mutant-P1A and Inactivated Malonate Semialdehyde Decarboxylase: A Structural Basis for the Decarboxylase and Hydratase Activities

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
F	d2aalf_	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	MSAD-like	Malonate semialdehyde decarboxylase, MSAD	(Pseudomonas pavonaceae ) [TaxId: 47881 ],	SCOPe (2.08)
E	d2aale_	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	MSAD-like	Malonate semialdehyde decarboxylase, MSAD	(Pseudomonas pavonaceae ) [TaxId: 47881 ],	SCOPe (2.08)
D	d2aald_	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	MSAD-like	Malonate semialdehyde decarboxylase, MSAD	(Pseudomonas pavonaceae ) [TaxId: 47881 ],	SCOPe (2.08)
C	d2aalc_	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	MSAD-like	Malonate semialdehyde decarboxylase, MSAD	(Pseudomonas pavonaceae ) [TaxId: 47881 ],	SCOPe (2.08)
B	d2aalb2	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	MSAD-like	Malonate semialdehyde decarboxylase, MSAD	(Pseudomonas pavonaceae ) [TaxId: 47881 ],	SCOPe (2.08)
B	d2aalb3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Pseudomonas pavonaceae ) [TaxId: 47881 ],	SCOPe (2.08)
A	d2aala1	Alpha and beta proteins (a+b)	Tautomerase/MIF	Tautomerase/MIF	MSAD-like	Malonate semialdehyde decarboxylase, MSAD	(Pseudomonas pavonaceae ) [TaxId: 47881 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	Tautomerase/MIF	8036809	3001770	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Tautomerase/MIF	8036809	3001770	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Tautomerase/MIF	8036809	3001770	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Tautomerase/MIF	8036809	3001770	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Tautomerase/MIF	8036809	3001770	SCOP2B (2022-06-29)
A	SCOP2 Family	MSAD-like	8024430	4003828	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Tautomerase/MIF	8036809	3001770	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F		e2aalF1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: Propep_M14	F:	ECOD (20:10:01)
E		e2aalE1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: Propep_M14	F:	ECOD (20:10:01)
D		e2aalD1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: Propep_M14	F:	ECOD (20:10:01)
C		e2aalC1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: Propep_M14	F:	ECOD (20:10:01)
B		e2aalB1	A: C-terminal subdomain in Lon-related proteases catalytic domains	X: C-terminal subdomain in Lon-related proteases catalytic domains	H: C-terminal subdomain in Lon-related proteases catalytic domains	T: Propep_M14	F:	ECOD (20:10:01)
A		e2aalA1	A: Tautomerase/MIF-like	X: Tautomerase/MIF	H: Tautomerase/MIF	T: Tautomerase, Tautomerase_2	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)
E	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)
D	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)
C	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)
B	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)
A	3.30.429.10	Alpha Beta	2-Layer Sandwich	Macrophage Migration Inhibitory Factor	Macrophage Migration Inhibitory Factor	CATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR037479	Tautomerase, MSAD family	Family
A, B, C, D, E A, B, C, D, E, F	IPR014347	Tautomerase/MIF superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.