Structural and Mutational Studies of the Catalytic Domain of Colicin E5a tRNA-Specific Ribonuclease
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | d2a8kd_ | Alpha and beta proteins (a+b) | Colicin D/E5 nuclease domain | Colicin D/E5 nuclease domain | Colicin E5 nuclease domain | Colicin E5 | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
| C | d2a8kc_ | Alpha and beta proteins (a+b) | Colicin D/E5 nuclease domain | Colicin D/E5 nuclease domain | Colicin E5 nuclease domain | Colicin E5 | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
| B | d2a8kb_ | Alpha and beta proteins (a+b) | Colicin D/E5 nuclease domain | Colicin D/E5 nuclease domain | Colicin E5 nuclease domain | Colicin E5 | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
| A | d2a8ka1 | Alpha and beta proteins (a+b) | Colicin D/E5 nuclease domain | Colicin D/E5 nuclease domain | Colicin E5 nuclease domain | Colicin E5 | (Escherichia coli ) [TaxId: 562 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D | SCOP2B Superfamily | Colicin D/E5 nuclease domain | 8040946 | 3001283 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Colicin D/E5 nuclease domain | 8040946 | 3001283 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Colicin D/E5 nuclease domain | 8040946 | 3001283 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Colicin D/E5 nuclease domain | 8040946 | 3001283 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | HSP90,HATPase_c_3 | e2a8kD1 | A: alpha arrays | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: HSP90,HATPase_c_3 | ECOD (v295.2) |
| C | HSP90,HATPase_c_3 | e2a8kC1 | A: alpha arrays | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: HSP90,HATPase_c_3 | ECOD (v295.2) |
| B | HSP90,HATPase_c_3 | e2a8kB1 | A: alpha arrays | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: HSP90,HATPase_c_3 | ECOD (v295.2) |
| A | HSP90,HATPase_c_3 | e2a8kA1 | A: alpha arrays | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: HSP90,HATPase_c_3 | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 3.30.2310.30 | Alpha Beta | 2-Layer Sandwich | YaeB-like fold | Colicin E5 C-terminal ribonuclease domain (CRD) | CATH (4.3.0) |
| C | 3.30.2310.30 | Alpha Beta | 2-Layer Sandwich | YaeB-like fold | Colicin E5 C-terminal ribonuclease domain (CRD) | CATH (4.3.0) |
| B | 3.30.2310.30 | Alpha Beta | 2-Layer Sandwich | YaeB-like fold | Colicin E5 C-terminal ribonuclease domain (CRD) | CATH (4.3.0) |
| A | 3.30.2310.30 | Alpha Beta | 2-Layer Sandwich | YaeB-like fold | Colicin E5 C-terminal ribonuclease domain (CRD) | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Colicin E5 | - | - |