2A3V | pdb_00002a3v

Structural basis for broad DNA-specificity in integron recombination

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth A]Phage_integrasee2a3vA1 A: alpha arraysX: Rubredoxin-likeH: HTHT: Ribbon-helix-helixF: Phage_integraseECOD (v295)
F [auth B]CopCe2a3vB1 A: alpha arraysX: HTHH: NudixT: winged helix domainF: CopCECOD (v295)
G [auth C]CopCe2a3vC1 A: alpha arraysX: HTHH: NudixT: winged helix domainF: CopCECOD (v295)
H [auth D]CopCe2a3vD1 A: alpha arraysX: HTHH: NudixT: winged helix domainF: CopCECOD (v295)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
E [auth A]1.10.150.130 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
E [auth A]1.10.443.10 Mainly Alpha Orthogonal Bundle hpI Integrase Chain ACATH (4.3.0)
F [auth B]1.10.150.130 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
F [auth B]1.10.443.10 Mainly Alpha Orthogonal Bundle hpI Integrase Chain ACATH (4.3.0)
G [auth C]1.10.150.130 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
G [auth C]1.10.443.10 Mainly Alpha Orthogonal Bundle hpI Integrase Chain ACATH (4.3.0)
H [auth D]1.10.150.130 Mainly Alpha Orthogonal Bundle DNA polymerase domain 1CATH (4.3.0)
H [auth D]1.10.443.10 Mainly Alpha Orthogonal Bundle hpI Integrase Chain ACATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth E],
C [auth G]		DNA (31-MER)---
B [auth F],
D [auth H]		DNA (34-MER)---
E [auth A],
F [auth B],
G [auth C],
H [auth D]		site-specific recombinase IntI4

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E [auth A],
F [auth B],
G [auth C],
H [auth D]		IPR011010DNA breaking-rejoining enzyme, catalytic coreHomologous Superfamily
E [auth A],
F [auth B],
G [auth C],
H [auth D]		IPR044068Core-binding domainDomain
E [auth A],
F [auth B],
G [auth C],
H [auth D]		IPR010998Integrase/recombinase, N-terminalHomologous Superfamily
E [auth A],
F [auth B],
G [auth C],
H [auth D]		IPR002104Integrase, catalytic domainDomain
E [auth A],
F [auth B],
G [auth C],
H [auth D]		IPR011946Integrase, integron-typeFamily
E [auth A],
F [auth B],
G [auth C],
H [auth D]		IPR004107Integrase, SAM-like, N-terminalDomain
E [auth A],
F [auth B],
G [auth C],
H [auth D]		IPR013762Integrase-like, catalytic domain superfamilyHomologous Superfamily
E [auth A],
F [auth B],
G [auth C],
H [auth D]		IPR050090Tyrosine recombinase XerC/XerD-likeFamily