Annotations: 29WM

Crystal structure of the G3BP1 NTF2L domain homodimer in complex with La Crosse virus nucleoprotein N-terminal peptide

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF02136	Nuclear transport factor 2 (NTF2) domain (NTF2)	Nuclear transport factor 2 (NTF2) domain	This family includes the NTF2-like Delta-5-3-ketosteroid isomerase proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
G [auth X], H [auth Y]	Nucleoprotein	RNA binding binding nucleic acid binding	symbiont-mediated perturbation of host cellular process symbiont-mediated suppression of host gene expression biological process involved in interspecies interaction between organisms symbiont-mediated perturbation of host process symbiont-mediated perturbation of host gene expression modulation of process of another organism biological process involved in interaction with host biological process involved in symbiotic interaction	protein-containing complex ribonucleoprotein complex viral nucleocapsid viral capsid virion component helical viral capsid
A, B, C, D, E A, B, C, D, E, F	Ras GTPase-activating protein-binding protein 1	nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid helicase activity ATP-dependent activity, acting on RNA ATP-dependent activity ATP-dependent activity, acting on DNA DNA/RNA helicase activity catalytic activity, acting on DNA catalytic activity macromolecular conformation isomerase activity molecular condensate scaffold activity protein-macromolecule adaptor activity nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid helicase activity ATP-dependent activity, acting on RNA ATP-dependent activity ATP-dependent activity, acting on DNA DNA/RNA helicase activity catalytic activity, acting on DNA catalytic activity macromolecular conformation isomerase activity molecular condensate scaffold activity protein-macromolecule adaptor activity molecular adaptor activity DNA helicase activity RNA binding binding nucleic acid binding mRNA binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides RNA helicase activity ribonucleoprotein complex binding protein-containing complex binding ribosomal small subunit binding ribosome binding	regulation of cellular component organization regulation of cellular process negative regulation of biological process membraneless organelle assembly negative regulation of organelle assembly regulation of cytoplasmic stress granule assembly cellular component biogenesis cellular component organization cellular component assembly cytoplasmic stress granule assembly negative regulation of cellular process cellular component organization or biogenesis negative regulation of cytoplasmic stress granule assembly regulation of biological process regulation of cellular component organization regulation of cellular process negative regulation of biological process membraneless organelle assembly negative regulation of organelle assembly regulation of cytoplasmic stress granule assembly cellular component biogenesis cellular component organization cellular component assembly cytoplasmic stress granule assembly negative regulation of cellular process cellular component organization or biogenesis negative regulation of cytoplasmic stress granule assembly regulation of biological process organelle assembly negative regulation of cellular component organization biological regulation regulation of cellular component biogenesis regulation of organelle organization organelle organization negative regulation of organelle organization regulation of organelle assembly cellular process positive regulation of organelle organization positive regulation of cellular component organization positive regulation of biological process positive regulation of cellular process positive regulation of cellular component biogenesis positive regulation of cytoplasmic stress granule assembly positive regulation of organelle assembly cellular response to stimulus small GTPase-mediated signal transduction response to stimulus signaling Ras protein signal transduction intracellular signal transduction cell communication intracellular signaling cassette signal transduction protein deubiquitination primary metabolic process protein modification by small protein removal macromolecule modification metabolic process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation or removal biological process involved in interspecies interaction between organisms defense response to virus defense response response to other organism response to stress response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus multicellular organismal process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process cytokine production regulation of cytokine production positive regulation of macromolecule metabolic process regulation of multicellular organismal process regulation of biosynthetic process positive regulation of type I interferon production type I interferon production regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process positive regulation of gene expression positive regulation of multicellular organismal process regulation of macromolecule biosynthetic process positive regulation of cytokine production regulation of metabolic process regulation of type I interferon production	cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction somatodendritic compartment cell body perikaryon neuronal cell body intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle cellular anatomical structure anchoring junction cell junction focal adhesion cell-substrate junction somatodendritic compartment cell body perikaryon neuronal cell body intracellular anatomical structure cytoplasmic ribonucleoprotein granule intracellular membraneless organelle ribonucleoprotein granule intracellular organelle organelle membraneless organelle cytoplasm supramolecular complex cytoplasmic stress granule cytosol membrane-bounded organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
G [auth X], H [auth Y]	IPR043011	Bunyavirus nucleocapsid (N) , C-terminal domain	Homologous Superfamily
G [auth X], H [auth Y]	IPR043012	Bunyavirus nucleocapsid (N) , N-terminal domain	Homologous Superfamily
G [auth X], H [auth Y]	IPR001784	Bunyavirus nucleocapsid (N) protein	Family
A, B, C, D, E A, B, C, D, E, F	IPR032710	NTF2-like domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR039539	Ras GTPase-activating protein-binding protein	Family
A, B, C, D, E A, B, C, D, E, F	IPR000504	RNA recognition motif domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR018222	Nuclear transport factor 2, eukaryote	Domain
A, B, C, D, E A, B, C, D, E, F	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR035979	RNA-binding domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F	IPR034374	G3BP1, RNA recognition motif	Domain
A, B, C, D, E A, B, C, D, E, F	IPR002075	Nuclear transport factor 2 domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D, E A, B, C, D, E, F	: Q13283	Sjogren syndrome astrocytic tumor exocrine pancreatic carcinoma glioblastoma large cell medulloblastoma malignant pancreatic neoplasm osteosarcoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia tuberculosis atypical teratoid rhabdoid tumor gastric cancer hepatocellular carcinoma lung adenocarcinoma medulloblastoma ovarian cancer Sjogren syndrome astrocytic tumor exocrine pancreatic carcinoma glioblastoma large cell medulloblastoma malignant pancreatic neoplasm osteosarcoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia tuberculosis atypical teratoid rhabdoid tumor gastric cancer hepatocellular carcinoma lung adenocarcinoma medulloblastoma ovarian cancer psoriasis ulcerative colitis breast cancer gastric carcinoma IgA glomerulonephritis lymphoplasmacytic lymphoma myopathy pancreatic intraductal papillary-mucinous carcinoma