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 29IY | pdb_000029iy

Human monosomes, focus on 60S subunit; control.


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth AV]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
C [auth AX]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
D [auth AY]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
E [auth AZ]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeThis entry represents the ribosomal eL33 previously known as L35A, eukaryotic and archaebacterial ribosomal proteins. Domain
Q [auth BB]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
Q [auth BB]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
R [auth BC]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
R [auth BC]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins. Domain
S [auth BD]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
W [auth CD]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
X [auth AK]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
Y [auth AL]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
Y [auth AL]PF25476Ribosomal protein L19e, C-terminal domain (Ribosomal_L19e_C)Ribosomal protein L19e, C-terminal domainThis domain is found at the C-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
Z [auth AM]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
CA [auth AP]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
DA [auth AQ]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
EA [auth AR]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
FA [auth AS]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
FA [auth AS]PF00467KOW motif (KOW)KOW motif- Family
GA [auth AT]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein familyThe N-terminal region of the eukaryotic ribosomal L27 has the KOW motif. C-terminal region is represented by this family. Domain
GA [auth AT]PF00467KOW motif (KOW)KOW motif- Family
HA [auth AU]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth AV]60S ribosomal protein L29
B [auth AW]60S ribosomal protein L30
C [auth AX]60S ribosomal protein L31
D [auth AY]60S ribosomal protein L32
E [auth AZ]Large ribosomal subunit protein eL33
F [auth Aa]60S ribosomal protein L34
G [auth Ab]60S ribosomal protein L35
H [auth Ac]60S ribosomal protein L36
I [auth Ad]Large ribosomal subunit protein eL37
J [auth Ae]60S ribosomal protein L38
K [auth Af]60S ribosomal protein L39
L [auth Ag]Large ribosomal subunit protein eL40
M [auth Ah]60S ribosomal protein L36a
N [auth Ai]60S ribosomal protein L37a
O [auth Aj]60S ribosomal protein L28
P [auth BA]Large ribosomal subunit protein uL3
Q [auth BB]60S ribosomal protein L4
R [auth BC]60S ribosomal protein L5
S [auth BD]Large ribosomal subunit protein eL6
T [auth CA]28S rRNA---
U [auth CB]5S rRNA---
V [auth CC]5.8S rRNA---
W [auth CD]Large ribosomal subunit protein uL2
X [auth AK]60S ribosomal protein L18
Y [auth AL]60S ribosomal protein L19
Z [auth AM]60S ribosomal protein L18a
AA [auth AN]60S ribosomal protein L21
BA [auth AO]60S ribosomal protein L22
CA [auth AP]60S ribosomal protein L23
DA [auth AQ]60S ribosomal protein L24
EA [auth AR]60S ribosomal protein L23a
FA [auth AS]60S ribosomal protein L26
GA [auth AT]60S ribosomal protein L27
HA [auth AU]Large ribosomal subunit protein uL15

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth AV]IPR002673Large ribosomal subunit protein eL29Family
B [auth AW]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
B [auth AW]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
B [auth AW]IPR000231Large ribosomal subunit protein eL30Family
B [auth AW]IPR039109Large ribosomal subunit protein eL30-likeFamily
B [auth AW]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
C [auth AX]IPR000054Large ribosomal subunit protein eL31Family
C [auth AX]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
C [auth AX]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
D [auth AY]IPR001515Large ribosomal subunit protein eL32Family
D [auth AY]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
D [auth AY]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
E [auth AZ]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
E [auth AZ]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
E [auth AZ]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
E [auth AZ]IPR001780Large ribosomal subunit protein eL33Family
F [auth Aa]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
F [auth Aa]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
F [auth Aa]IPR008195Large ribosomal subunit protein eL34Family
G [auth Ab]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
G [auth Ab]IPR045059Large ribosomal subunit protein uL29, eukaryotaFamily
G [auth Ab]IPR001854Large ribosomal subunit protein uL29Family
G [auth Ab]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
H [auth Ac]IPR000509Large ribosomal subunit protein eL36Family
H [auth Ac]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
I [auth Ad]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
I [auth Ad]IPR001569Large ribosomal subunit protein eL37Family
I [auth Ad]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
I [auth Ad]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
J [auth Ae]IPR002675Large ribosomal subunit protein eL38Family
J [auth Ae]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
K [auth Af]IPR000077Large ribosomal subunit protein eL39Family
K [auth Af]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
K [auth Af]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
L [auth Ag]IPR019954Ubiquitin conserved siteConserved Site
L [auth Ag]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
L [auth Ag]IPR050158Ubiquitin and ubiquitin-likeFamily
L [auth Ag]IPR000626Ubiquitin-like domainDomain
L [auth Ag]IPR019956Ubiquitin domainDomain
L [auth Ag]IPR001975Large ribosomal subunit protein eL40 domainDomain
L [auth Ag]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
M [auth Ah]IPR000552Large ribosomal subunit protein eL42Family
M [auth Ah]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
M [auth Ah]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
N [auth Ai]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
N [auth Ai]IPR002674Large ribosomal subunit protein eL43Family
N [auth Ai]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
O [auth Aj]IPR029004Ribosomal eL28/Mak16Domain
O [auth Aj]IPR002672Large ribosomal subunit protein eL28Family
P [auth BA]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
P [auth BA]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
P [auth BA]IPR000597Large ribosomal subunit protein uL3Family
P [auth BA]IPR045077Large ribosomal subunit protein uL3, archaea/eukaryotaFamily
P [auth BA]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
Q [auth BB]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
Q [auth BB]IPR002136Large ribosomal subunit protein uL4Family
Q [auth BB]IPR013000Large ribosomal subunit protein uL4, eukaryota/archaea, conserved siteConserved Site
Q [auth BB]IPR045240Large ribosomal subunit protein uL4, eukaryota/archaeaFamily
Q [auth BB]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
R [auth BC]IPR057268Large ribosomal subunit protein uL18Family
R [auth BC]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
R [auth BC]IPR005485Large ribosomal subunit protein uL18, eukaryota/archaeaFamily
S [auth BD]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
S [auth BD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
S [auth BD]IPR000915Large ribosomal subunit protein eL6Family
S [auth BD]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
S [auth BD]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
S [auth BD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
W [auth CD]IPR023672Large ribosomal subunit protein uL2, archaea/eukaryotaFamily
W [auth CD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
W [auth CD]IPR002171Large ribosomal subunit protein uL2Family
W [auth CD]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
W [auth CD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
W [auth CD]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
W [auth CD]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
W [auth CD]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
W [auth CD]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
X [auth AK]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
X [auth AK]IPR000039Large ribosomal subunit protein eL18Family
X [auth AK]IPR021131Large ribosomal subunit protein uL15/eL18Domain
X [auth AK]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Y [auth AL]IPR039547Large ribosomal subunit protein eL19Family
Y [auth AL]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
Y [auth AL]IPR057260Ribosomal protein L19e, C-terminal domainDomain
Y [auth AL]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
Y [auth AL]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
Y [auth AL]IPR057259Ribosomal protein L19e, N-terminal domainDomain
Y [auth AL]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
Y [auth AL]IPR000196Large ribosomal subunit protein eL19 domainDomain
Z [auth AM]IPR028877Large ribosomal subunit protein eL20Family
Z [auth AM]IPR021138Large ribosomal subunit protein eL20, eukaryotaFamily
Z [auth AM]IPR023573Large ribosomal subunit protein eL20 domainDomain
AA [auth AN]IPR001147Large ribosomal subunit protein eL21Family
AA [auth AN]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth AN]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
AA [auth AN]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
BA [auth AO]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
BA [auth AO]IPR002671Large ribosomal subunit protein eL22Family
CA [auth AP]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
CA [auth AP]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
CA [auth AP]IPR000218Large ribosomal subunit protein uL14Family
DA [auth AQ]IPR011017TRASH domainDomain
DA [auth AQ]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
DA [auth AQ]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
DA [auth AQ]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
DA [auth AQ]IPR056366Large ribosomal subunit protein eL24Family
EA [auth AR]IPR019985Large ribosomal subunit protein uL23Family
EA [auth AR]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
EA [auth AR]IPR013025Large ribosomal subunit protein uL23-likeFamily
EA [auth AR]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
EA [auth AR]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
EA [auth AR]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
FA [auth AS]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
FA [auth AS]IPR005756Large ribosomal subunit protein uL24, eukaryota_archaeaFamily
FA [auth AS]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
FA [auth AS]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FA [auth AS]IPR005824KOWDomain
FA [auth AS]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
GA [auth AT]IPR001141Large ribosomal subunit protein eL27Family
GA [auth AT]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
GA [auth AT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
GA [auth AT]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
GA [auth AT]IPR005824KOWDomain
GA [auth AT]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
HA [auth AU]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
HA [auth AU]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
HA [auth AU]IPR021131Large ribosomal subunit protein uL15/eL18Domain
HA [auth AU]IPR030878Large ribosomal subunit protein uL15Family
HA [auth AU]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth AW]:  P62888
C [auth AX]:  P62899
D [auth AY]:  P62910
E [auth AZ]:  P18077
F [auth Aa]:  P49207
G [auth Ab]:  P42766
H [auth Ac]:  Q9Y3U8
I [auth Ad]:  P61927
J [auth Ae]:  P63173
L [auth Ag]:  P62987
M [auth Ah]:  P83881
N [auth Ai]:  P61513
O [auth Aj]:  P46779
P [auth BA]:  P39023
Q [auth BB]:  P36578
R [auth BC]:  P46777
S [auth BD]:  Q02878
X [auth AK]:  Q07020
Y [auth AL]:  P84098
AA [auth AN]:  P46778
BA [auth AO]:  P35268
CA [auth AP]:  P62829
DA [auth AQ]:  P83731
EA [auth AR]:  P62750
FA [auth AS]:  P61254
GA [auth AT]:  P61353
HA [auth AU]:  P46776

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
L [auth Ag]MLZ Parent Component: LYS

:  AA0076

:  N6-methyl-L-lysine MOD:00085
P [auth BA]HIC Parent Component: HIS

:  AA0076 , AA0317

:  N6-methyl-L-lysine MOD:00085 , 1'-methyl-L-histidine MOD:00322
T [auth CA]1MA Parent Component: A

:  AA0076 , AA0317

T [auth CA]5MC Parent Component: C

:  AA0076 , AA0317

T [auth CA]6MZ Parent Component: A

:  AA0076 , AA0317

T [auth CA]A2M Parent Component: A

:  AA0076 , AA0317

T [auth CA]B8T Parent Component: C

:  AA0076 , AA0317

T [auth CA]OMC Parent Component: C

:  AA0076 , AA0317

T [auth CA]OMG Parent Component: G

:  AA0076 , AA0317

T [auth CA]OMU Parent Component: U

:  AA0076 , AA0317

T [auth CA]PSU Parent Component: U

:  AA0076 , AA0317

T [auth CA]UR3 Parent Component: U

:  AA0076 , AA0317

T [auth CA]UY1 :  AA0076 , AA0317

V [auth CC]OMG Parent Component: G

:  AA0076 , AA0317

V [auth CC]PSU Parent Component: U

:  AA0076 , AA0317

W [auth CD]V5N Parent Component: HIS

:  AA0076 , AA0317

HA [auth AU]V5N Parent Component: HIS

:  AA0076 , AA0317