28ZB | pdb_000028zb

Crystal Structure of HLA class II major histocompatibility complex bound to HCMV-IE1 peptide

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
G [auth J]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054671 3000071 SCOP2B (2022-06-29)
G [auth J]SCOP2B SuperfamilyMHC antigen-recognition domain 8040455 3000521 SCOP2B (2022-06-29)
E [auth G]SCOP2B SuperfamilyMHC antigen-recognition domain 8040455 3000521 SCOP2B (2022-06-29)
E [auth G]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054671 3000071 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054671 3000071 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyMHC antigen-recognition domain 8040455 3000521 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyMHC antigen-recognition domain 8040455 3000521 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054671 3000071 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B,
D [auth E],
F [auth H],
H [auth K]		PF00969Class II histocompatibility antigen, beta domain (MHC_II_beta)Class II histocompatibility antigen, beta domainDomain
B,
D [auth E],
F [auth H],
H [auth K]		PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain
A,
C [auth D],
E [auth G],
G [auth J]		PF07654Immunoglobulin C1-set domain (C1-set)Immunoglobulin C1-set domainDomain
A,
C [auth D],
E [auth G],
G [auth J]		PF00993Class II histocompatibility antigen, alpha domain (MHC_II_alpha)Class II histocompatibility antigen, alpha domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B,
D [auth E],
F [auth H],
H [auth K]		Regulatory protein IE1,HLA class II histocompatibility antigen DR beta chain-
A,
C [auth D],
E [auth G],
G [auth J]		HLA class II histocompatibility antigen, DR alpha chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B,
D [auth E],
F [auth H],
H [auth K]		IPR000353MHC class II, beta chain, N-terminalDomain
B,
D [auth E],
F [auth H],
H [auth K]		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
B,
D [auth E],
F [auth H],
H [auth K]		IPR050160Major Histocompatibility Complex/ImmunoglobulinFamily
B,
D [auth E],
F [auth H],
H [auth K]		IPR014745MHC class II, alpha/beta chain, N-terminalHomologous Superfamily
B,
D [auth E],
F [auth H],
H [auth K]		IPR003597Immunoglobulin C1-setDomain
B,
D [auth E],
F [auth H],
H [auth K]		IPR013783Immunoglobulin-like foldHomologous Superfamily
B,
D [auth E],
F [auth H],
H [auth K]		IPR011162MHC classes I/II-like antigen recognition proteinHomologous Superfamily
B,
D [auth E],
F [auth H],
H [auth K]		IPR007110Immunoglobulin-like domainDomain
B,
D [auth E],
F [auth H],
H [auth K]		IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
A,
C [auth D],
E [auth G],
G [auth J]		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A,
C [auth D],
E [auth G],
G [auth J]		IPR050160Major Histocompatibility Complex/ImmunoglobulinFamily
A,
C [auth D],
E [auth G],
G [auth J]		IPR003597Immunoglobulin C1-setDomain
A,
C [auth D],
E [auth G],
G [auth J]		IPR011162MHC classes I/II-like antigen recognition proteinHomologous Superfamily
A,
C [auth D],
E [auth G],
G [auth J]		IPR003006Immunoglobulin/major histocompatibility complex, conserved siteConserved Site
A,
C [auth D],
E [auth G],
G [auth J]		IPR014745MHC class II, alpha/beta chain, N-terminalHomologous Superfamily
A,
C [auth D],
E [auth G],
G [auth J]		IPR013783Immunoglobulin-like foldHomologous Superfamily
A,
C [auth D],
E [auth G],
G [auth J]		IPR007110Immunoglobulin-like domainDomain
A,
C [auth D],
E [auth G],
G [auth J]		IPR001003MHC class II, alpha chain, N-terminalDomain