23SO | pdb_000023so

Cryo-EM structure of the cebranopadol-mu opioid receptor-Gi complex

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B]	Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	cytoskeletal protein binding spectrin binding protein-containing complex binding protein binding binding enzyme binding GTPase binding phosphoric ester hydrolase activity alkylglycerophosphoethanolamine phosphodiesterase activity hydrolase activity, acting on ester bonds phosphoric diester hydrolase activity hydrolase activity catalytic activity pyrophosphatase activity cytoskeletal protein binding spectrin binding protein-containing complex binding protein binding binding enzyme binding GTPase binding phosphoric ester hydrolase activity alkylglycerophosphoethanolamine phosphodiesterase activity hydrolase activity, acting on ester bonds phosphoric diester hydrolase activity hydrolase activity catalytic activity pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity, acting on acid anhydrides signaling receptor complex adaptor activity protein-macromolecule adaptor activity molecular adaptor activity signaling adaptor activity	positive regulation of cytosolic calcium ion concentration biological regulation regulation of biological quality multicellular organismal process system process sensory perception of chemical stimulus sensory perception nervous system process sensory perception of taste developmental process sensory organ development eye development animal organ development retina development in camera-type eye positive regulation of cytosolic calcium ion concentration biological regulation regulation of biological quality multicellular organismal process system process sensory perception of chemical stimulus sensory perception nervous system process sensory perception of taste developmental process sensory organ development eye development animal organ development retina development in camera-type eye visual system development multicellular organism development camera-type eye development anatomical structure development sensory system development system development response to decreased oxygen levels cellular response to stimulus response to stimulus cellular response to oxygen levels cellular response to hypoxia cellular response to decreased oxygen levels cellular response to chemical stimulus cellular response to stress response to hypoxia response to stress response to chemical response to oxygen levels response to abiotic stimulus cellular process cell population proliferation regulation of biological process regulation of cellular process signaling phospholipase C-activating G protein-coupled receptor signaling pathway cell communication G protein-coupled receptor signaling pathway signal transduction muscle cell apoptotic process striated muscle cell apoptotic process apoptotic process cell death programmed cell death cardiac muscle cell apoptotic process	protein-containing complex extrinsic component of plasma membrane catalytic complex plasma membrane protein complex cytoplasmic side of membrane membrane plasma membrane membrane protein complex heterotrimeric G-protein complex side of membrane cell periphery cellular anatomical structure cytoplasmic side of plasma membrane GTPase complex protein-containing complex extrinsic component of plasma membrane catalytic complex plasma membrane protein complex cytoplasmic side of membrane membrane plasma membrane membrane protein complex heterotrimeric G-protein complex side of membrane cell periphery cellular anatomical structure cytoplasmic side of plasma membrane GTPase complex extrinsic component of membrane extrinsic component of cytoplasmic side of plasma membrane photoreceptor inner segment somatodendritic compartment cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection intracellular anatomical structure cytoplasm membrane-bounded organelle non-motile cilium 9+0 non-motile cilium cilium photoreceptor outer segment photoreceptor cell cilium organelle ciliary membrane photoreceptor outer segment membrane bounding membrane of organelle plasma membrane region organelle membrane cell projection membrane synapse cell junction cell body
B [auth C]	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2	protein binding binding G-protein beta-subunit binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	cellular response to nitrogen compound cellular response to stimulus response to dopamine regulation of cellular process response to stimulus signaling cellular response to dopamine response to monoamine cell communication response to catecholamine adenylate cyclase-activating dopamine receptor signaling pathway cellular response to catecholamine stimulus signal transduction regulation of biological process cellular response to nitrogen compound cellular response to stimulus response to dopamine regulation of cellular process response to stimulus signaling cellular response to dopamine response to monoamine cell communication response to catecholamine adenylate cyclase-activating dopamine receptor signaling pathway cellular response to catecholamine stimulus signal transduction regulation of biological process G protein-coupled dopamine receptor signaling pathway biological regulation response to oxygen-containing compound response to nitrogen compound adenylate cyclase-activating G protein-coupled receptor signaling pathway cellular response to oxygen-containing compound cellular response to chemical stimulus cellular response to monoamine stimulus response to chemical adenylate cyclase-modulating G protein-coupled receptor signaling pathway cellular process G protein-coupled receptor signaling pathway response to ketone response to prostaglandin response to lipid response to endogenous stimulus response to alcohol cellular response to prostaglandin stimulus cellular response to endogenous stimulus cellular response to prostaglandin E stimulus cellular response to alcohol response to hormone cellular response to lipid response to prostaglandin E cellular response to ketone cellular response to hormone stimulus	cell periphery cellular anatomical structure plasma membrane membrane protein-containing complex extrinsic component of plasma membrane catalytic complex plasma membrane protein complex cytoplasmic side of membrane membrane protein complex heterotrimeric G-protein complex side of membrane cytoplasmic side of plasma membrane GTPase complex cell periphery cellular anatomical structure plasma membrane membrane protein-containing complex extrinsic component of plasma membrane catalytic complex plasma membrane protein complex cytoplasmic side of membrane membrane protein complex heterotrimeric G-protein complex side of membrane cytoplasmic side of plasma membrane GTPase complex extrinsic component of membrane extrinsic component of cytoplasmic side of plasma membrane
C [auth F], F [auth A]	Guanine nucleotide-binding protein G(i) subunit alpha-1	D2 dopamine receptor binding protein binding binding signaling receptor binding G protein-coupled receptor binding dopamine receptor binding enzyme regulator activity adenylate cyclase inhibitor activity cyclase regulator activity molecular function inhibitor activity cyclase inhibitor activity molecular function regulator activity enzyme inhibitor activity adenylate cyclase regulator activity D2 dopamine receptor binding protein binding binding signaling receptor binding G protein-coupled receptor binding dopamine receptor binding enzyme regulator activity adenylate cyclase inhibitor activity cyclase regulator activity molecular function inhibitor activity cyclase inhibitor activity molecular function regulator activity enzyme inhibitor activity adenylate cyclase regulator activity guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cation binding magnesium ion binding metal ion binding GDP binding G protein-coupled serotonin receptor binding protein-containing complex binding G-protein beta/gamma-subunit complex binding pyrophosphatase activity GTPase activity G protein activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cell communication G protein-coupled receptor signaling pathway cellular process signal transduction neuropeptide signaling pathway adenylate cyclase-inhibiting serotonin receptor signaling pathway G protein-coupled serotonin receptor signaling pathway adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cell communication G protein-coupled receptor signaling pathway cellular process signal transduction neuropeptide signaling pathway adenylate cyclase-inhibiting serotonin receptor signaling pathway G protein-coupled serotonin receptor signaling pathway adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway adenylate cyclase-modulating G protein-coupled receptor signaling pathway response to hormone response to chemical response to endogenous stimulus response to peptide hormone response to oxygen-containing compound response to nitrogen compound cell division leukocyte migration immune system process mononuclear cell migration lymphocyte migration cell migration T cell migration cell motility regulation of steroid biosynthetic process regulation of cholesterol biosynthetic process regulation of cholesterol metabolic process steroid metabolic process regulation of lipid metabolic process sterol metabolic process positive regulation of biological process cholesterol metabolic process lipid biosynthetic process alcohol metabolic process regulation of primary metabolic process positive regulation of metabolic process regulation of small molecule metabolic process positive regulation of biosynthetic process positive regulation of lipid metabolic process small molecule metabolic process steroid biosynthetic process positive regulation of cellular process regulation of biosynthetic process secondary alcohol biosynthetic process regulation of alcohol biosynthetic process small molecule biosynthetic process regulation of steroid metabolic process cholesterol biosynthetic process positive regulation of cholesterol biosynthetic process primary metabolic process secondary alcohol metabolic process positive regulation of steroid biosynthetic process biosynthetic process sterol biosynthetic process positive regulation of lipid biosynthetic process regulation of sterol biosynthetic process alcohol biosynthetic process positive regulation of cholesterol metabolic process positive regulation of steroid metabolic process metabolic process regulation of lipid biosynthetic process positive regulation of small molecule metabolic process regulation of metabolic process positive regulation of alcohol biosynthetic process positive regulation of sterol biosynthetic process lipid metabolic process cell surface receptor signaling pathway response to cytokine response to chemokine cytokine-mediated signaling pathway cellular response to chemokine chemokine-mediated signaling pathway response to peptide cellular response to cytokine stimulus multicellular organismal process system process relaxation of smooth muscle regulation of system process regulation of muscle system process muscle system process relaxation of muscle positive regulation of relaxation of smooth muscle positive regulation of relaxation of muscle positive regulation of multicellular organismal process regulation of multicellular organismal process regulation of relaxation of smooth muscle regulation of relaxation of muscle adenylate cyclase-activating G protein-coupled receptor signaling pathway regulation of cytoskeleton organization regulation of cellular component organization microtubule cytoskeleton organization regulation of mitotic spindle organization mitotic cell cycle cellular component organization cell cycle cellular component organization or biogenesis regulation of cell cycle microtubule cytoskeleton organization involved in mitosis spindle organization cell cycle process regulation of cell cycle process regulation of microtubule-based process regulation of spindle organization regulation of organelle organization mitotic spindle organization organelle organization mitotic cell cycle process microtubule-based process cytoskeleton organization regulation of microtubule cytoskeleton organization positive regulation of protein localization to cell periphery regulation of localization protein localization to cell periphery regulation of protein localization positive regulation of protein localization to cell cortex regulation of protein localization to cell periphery localization regulation of protein localization to cell cortex macromolecule localization positive regulation of protein localization intracellular protein localization protein localization to cell cortex establishment of organelle localization regulated exocytosis cellular localization transport cell activation involved in immune response leukocyte degranulation myeloid leukocyte activation myeloid leukocyte mediated immunity vesicle-mediated transport leukocyte activation secretion by cell organelle localization leukocyte activation involved in immune response establishment of localization in cell mast cell activation leukocyte mediated immunity mast cell mediated immunity immune response secretion cell activation vacuolar localization export from cell mast cell degranulation establishment of localization myeloid cell activation involved in immune response immune effector process mast cell activation involved in immune response exocytosis lysosome localization regulation of behavior behavior regulation of eating behavior eating behavior feeding behavior regulation of feeding behavior response to ketone response to prostaglandin response to lipid response to alcohol response to prostaglandin E cellular response to forskolin cellular response to oxygen-containing compound cellular response to chemical stimulus cellular response to alcohol response to forskolin cellular response to lipid cellular response to ketone	midbody cellular anatomical structure cell periphery cell cortex intracellular anatomical structure cytoplasm protein-containing complex extrinsic component of plasma membrane catalytic complex plasma membrane protein complex cytoplasmic side of membrane membrane plasma membrane membrane protein complex midbody cellular anatomical structure cell periphery cell cortex intracellular anatomical structure cytoplasm protein-containing complex extrinsic component of plasma membrane catalytic complex plasma membrane protein complex cytoplasmic side of membrane membrane plasma membrane membrane protein complex heterotrimeric G-protein complex side of membrane cytoplasmic side of plasma membrane GTPase complex extrinsic component of membrane extrinsic component of cytoplasmic side of plasma membrane extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle intracellular organelle centrosome microtubule organizing center cytoskeleton membraneless organelle intracellular membraneless organelle microtubule cytoskeleton cytosol vacuolar membrane lytic vacuole vacuole intracellular membrane-bounded organelle lytic vacuole membrane bounding membrane of organelle lysosomal membrane organelle membrane lysosome cilium plasma membrane bounded cell projection ciliary basal body cell projection nucleus
D [auth M], E [auth R]	Mu-type opioid receptor	molecular transducer activity G protein-coupled receptor activity transmembrane signaling receptor activity signaling receptor activity calcium channel activity monoatomic cation transmembrane transporter activity voltage-gated calcium channel activity gated channel activity monoatomic ion channel activity voltage-gated channel activity voltage-gated monoatomic ion channel activity voltage-gated monoatomic cation channel activity monoatomic cation channel activity passive transmembrane transporter activity molecular transducer activity G protein-coupled receptor activity transmembrane signaling receptor activity signaling receptor activity calcium channel activity monoatomic cation transmembrane transporter activity voltage-gated calcium channel activity gated channel activity monoatomic ion channel activity voltage-gated channel activity voltage-gated monoatomic ion channel activity voltage-gated monoatomic cation channel activity monoatomic cation channel activity passive transmembrane transporter activity calcium ion transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity transporter activity metal ion transmembrane transporter activity transmembrane transporter activity protein binding binding G-protein beta-subunit binding neuropeptide binding peptide binding G-protein alpha-subunit binding peptide receptor activity beta-endorphin receptor activity G protein-coupled opioid receptor activity G protein-coupled peptide receptor activity melanocortin receptor activity neuropeptide receptor activity morphine receptor activity	cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cell communication G protein-coupled receptor signaling pathway cellular process signal transduction neuropeptide signaling pathway cellular response to nitrogen compound synaptic signaling cellular response to acetylcholine cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cell communication G protein-coupled receptor signaling pathway cellular process signal transduction neuropeptide signaling pathway cellular response to nitrogen compound synaptic signaling cellular response to acetylcholine response to oxygen-containing compound cell-cell signaling response to nitrogen compound acetylcholine receptor signaling pathway postsynaptic signal transduction cellular response to oxygen-containing compound adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway cellular response to chemical stimulus G protein-coupled acetylcholine receptor signaling pathway response to chemical adenylate cyclase-modulating G protein-coupled receptor signaling pathway response to acetylcholine adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway positive regulation of cell communication positive regulation of signal transduction positive regulation of biological process regulation of signal transduction intracellular signal transduction positive regulation of response to stimulus positive regulation of ERK1 and ERK2 cascade regulation of intracellular signal transduction intracellular signaling cassette positive regulation of cellular process regulation of signaling positive regulation of MAPK cascade positive regulation of intracellular signal transduction regulation of MAPK cascade regulation of response to stimulus MAPK cascade regulation of cell communication ERK1 and ERK2 cascade regulation of ERK1 and ERK2 cascade positive regulation of signaling regulation of localization transport regulation of signaling receptor activity regulation of transmembrane transporter activity localization regulation of NMDA receptor activity regulation of transport establishment of localization transmembrane transport regulation of molecular function regulation of transmembrane transport regulation of neurotransmitter receptor activity G protein-coupled opioid receptor signaling pathway regulation of cellular response to stress cellular response to stress regulation of response to stress response to stress regulation of biosynthetic process regulation of nitric oxide biosynthetic process negative regulation of metabolic process negative regulation of biological process reactive nitrogen species metabolic process nitric oxide metabolic process nitric oxide biosynthetic process biosynthetic process negative regulation of nitric oxide biosynthetic process negative regulation of biosynthetic process negative regulation of cellular process metabolic process regulation of nitric oxide metabolic process regulation of metabolic process multicellular organismal process system process sensory perception nervous system process behavior adult behavior response to alcohol behavioral response to ethanol response to ethanol negative regulation of cell population proliferation cell population proliferation regulation of cell population proliferation phospholipase C-activating G protein-coupled receptor signaling pathway regulation of biological quality negative regulation of cytosolic calcium ion concentration positive regulation of nervous system development regulation of developmental process cellular developmental process cell development regulation of cell differentiation regulation of neurogenesis regulation of cell development regulation of nervous system development positive regulation of developmental process multicellular organism development neurogenesis positive regulation of cell differentiation cell differentiation anatomical structure development positive regulation of neurogenesis regulation of multicellular organismal process system development developmental process regulation of multicellular organismal development positive regulation of cell development nervous system development positive regulation of multicellular organismal process sensory perception of pain negative regulation of protein transport establishment of protein localization regulation of protein localization negative regulation of signaling negative regulation of Wnt protein secretion negative regulation of transport negative regulation of cell communication protein localization to extracellular region secretion by cell regulation of secretion by cell negative regulation of secretion signal release negative regulation of secretion by cell intracellular protein localization regulation of Wnt protein secretion negative regulation of protein localization secretion establishment of protein localization to extracellular region regulation of establishment of protein localization export from cell negative regulation of establishment of protein localization regulation of protein transport Wnt protein secretion protein secretion regulation of protein secretion regulation of secretion negative regulation of protein secretion protein transport macromolecule localization G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger	somatodendritic compartment cell body cellular anatomical structure perikaryon neuronal cell body cell periphery plasma membrane membrane cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection membrane-bounded organelle somatodendritic compartment cell body cellular anatomical structure perikaryon neuronal cell body cell periphery plasma membrane membrane cell projection dendrite dendritic tree neuron projection plasma membrane bounded cell projection membrane-bounded organelle intracellular organelle intracellular anatomical structure Golgi apparatus organelle cytoplasm intracellular membrane-bounded organelle endomembrane system endosome intracellular vesicle cytoplasmic vesicle vesicle synapse cell junction axon endoplasmic reticulum
G [auth E]	scFv16	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B]	IPR019775	WD40 repeat, conserved site	Conserved Site
A [auth B]	IPR020472	PAC1/LIS1-like, WD-40 repeat	Repeat
A [auth B]	IPR001632	G-protein beta subunit-like, WD40 repeats	Domain
A [auth B]	IPR015943	WD40/YVTN repeat-like-containing domain superfamily	Homologous Superfamily
A [auth B]	IPR016346	G-protein subunit beta 1-5	Family
A [auth B]	IPR036322	WD40-repeat-containing domain superfamily	Homologous Superfamily
A [auth B]	IPR001680	WD40 repeat	Repeat
B [auth C]	IPR015898	G-protein, gamma subunit-like domain	Domain
B [auth C]	IPR036284	G-protein gamma-like domain superfamily	Homologous Superfamily
B [auth C]	IPR001770	G-protein, gamma subunit	Family
C [auth F], F [auth A]	IPR001019	Guanine nucleotide binding protein, alpha subunit	Family
C [auth F], F [auth A]	IPR011025	G protein alpha subunit, helical insertion	Homologous Superfamily
C [auth F], F [auth A]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
C [auth F], F [auth A]	IPR001408	G-protein alpha subunit, group I	Family
D [auth M], E [auth R]	IPR001418	Opioid receptor	Family
D [auth M], E [auth R]	IPR000276	G protein-coupled receptor, rhodopsin-like	Family
D [auth M], E [auth R]	IPR017452	GPCR, rhodopsin-like, 7TM	Domain
D [auth M], E [auth R]	IPR000105	Mu opioid receptor	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
C [auth F], F [auth A]	: P63096	substance withdrawal syndrome dissociative amnesia malignant glioma nicotine dependence pancreatic ductal adenocarcinoma acute myeloid leukemia Withdrawal Symptoms breast cancer glioblastoma intellectual disability large cell medulloblastoma malignant pancreatic neoplasm oligodendroglioma Pick disease astrocytic tumor substance withdrawal syndrome dissociative amnesia malignant glioma nicotine dependence pancreatic ductal adenocarcinoma acute myeloid leukemia Withdrawal Symptoms breast cancer glioblastoma intellectual disability large cell medulloblastoma malignant pancreatic neoplasm oligodendroglioma Pick disease astrocytic tumor breast carcinoma interstitial cystitis malignant colon neoplasm medulloblastoma ovarian cancer subependymal giant cell astrocytoma amnestic disorder atypical teratoid rhabdoid tumor breast fibroadenoma ductal breast carcinoma in situ invasive ductal breast carcinoma
D [auth M], E [auth R]	: P35372	hepatitis C virus infection alcohol abuse hepatic encephalopathy opiate dependence B-cell chronic lymphocytic leukemia morphine dependence cocaine abuse Pruritus hepatic coma neuralgia epilepsy cocaine dependence constipation disorder heroin dependence lingual-facial-buccal dyskinesia hepatitis C virus infection alcohol abuse hepatic encephalopathy opiate dependence B-cell chronic lymphocytic leukemia morphine dependence cocaine abuse Pruritus hepatic coma neuralgia epilepsy cocaine dependence constipation disorder heroin dependence lingual-facial-buccal dyskinesia substance abuse AIDS dementia complex visual epilepsy respiratory failure amphetamine abuse ovarian cancer substance withdrawal syndrome depressive disorder allergic rhinitis drug psychosis schizophrenia 12 large cell medulloblastoma malignant glioma osteoarthritis substance dependence movement disorder substance-related disorder common cold alcohol dependence viral encephalitis drug dependence rhinitis osteosarcoma pain agnosia glioblastoma diarrheal disease schizophrenia obesity disorder atypical teratoid rhabdoid tumor

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.