1XEQ | pdb_00001xeq

Crystal tructure of RNA binding domain of influenza B virus non-structural protein


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyS15/NS1 RNA-binding domain 8033708 3001284 SCOP2B (2022-06-29)
ASCOP2 FamilyN-terminal, RNA-binding domain of nonstructural protein NS1 8021328 4000764 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyS15/NS1 RNA-binding domain 8033708 3001284 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be1xeqB2 A: Fusion glycoprotein F2X: Fusion glycoprotein F2H: Fusion glycoprotein F2T: SRP_SPBF:ECOD (20:10:01)
Ae1xeqA1 A: S15/NS1 RNA-binding domainX: S15/NS1 RNA-binding domainH: S15/NS1 RNA-binding domainT: Flu_B_NS1F:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.10.287.10 Mainly Alpha Orthogonal Bundle Helix Hairpins S15/NS1, RNA-bindingCATH (4.3.0)
A1.10.287.10 Mainly Alpha Orthogonal Bundle Helix Hairpins S15/NS1, RNA-bindingCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Nonstructural protein NS1

InterPro: Protein Family Classification InterPro Database Homepage