1WK1 | pdb_00001wk1

Solution structure of Lectin C-type domain derived from a hypothetical protein from C. elegans

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1wk1a1	Alpha and beta proteins (a+b)	C-type lectin-like	C-type lectin-like	C-type lectin domain	Hypothetical protein F28B4.3	(Caenorhabditis elegans ) [TaxId: 6239 ],	SCOPe (2.08)
A	d1wk1a3	Artifacts	Tags	Tags	Tags	C-terminal Tags	(Caenorhabditis elegans ) [TaxId: 6239 ],	SCOPe (2.08)
A	d1wk1a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Caenorhabditis elegans ) [TaxId: 6239 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	C-type lectin domain	8031245	4002453	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	C-type lectin-like	8043623	3001261	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Lectin_C	e1wk1A1	A: a+b complex topology	X: C-type lectin-like (From Homology)	H: C-type lectin-like	T: C-type lectin-like	F: Lectin_C	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.100.10	Alpha Beta	Roll	Mannose-Binding Protein A	Chain A	CATH (4.2.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00059	Lectin C-type domain (Lectin_C)	Lectin C-type domain	This family includes both long and short form C-type	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR057086	Irg-7, N-terminal galactose binding domain	Domain
A	IPR056861	Hemicentin-1-like, von Willebrand factor A domain	Domain
A	IPR053295	Innate immunity regulator	Family
A	IPR001304	C-type lectin-like	Domain
A	IPR016186	C-type lectin-like/link domain superfamily	Homologous Superfamily
A	IPR002035	von Willebrand factor, type A	Domain
A	IPR002049	Laminin-type EGF domain	Domain
A	IPR036465	von Willebrand factor A-like domain superfamily	Homologous Superfamily
A	IPR057085	Irg-7-like, Ig-like domain	Domain
A	IPR016187	C-type lectin fold	Homologous Superfamily
A	IPR000742	EGF-like domain	Domain
A	IPR006582	MD domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.