1WJ9
Crystal structure of a CRISPR-associated protein from thermus thermophilus
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d1wj9a1 | Alpha and beta proteins (a+b) | Ferredoxin-like | Ferredoxin-like domains from CRISPR-associated proteins | CRISPR-associated endoribonuclease Cse3-like | CRISPR-associated endoribonuclease Cse3 | (Thermus thermophilus ) [TaxId: 274 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | CRISPR-associated protein | 8031230 | 4003815 | SCOP2 (2022-06-29) |
A | SCOP2 Family | CRISPR-associated protein | 8031231 | 4003815 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | CRISPR-associated proteins | 8043608 | 3001554 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | CRISPR-associated proteins | 8043609 | 3001554 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF08798 | e1wj9A2 | A: a+b two layers | X: Alpha-beta plaits | H: CRISPR transcript (pre-crRNA) processing endoribonuclease-related (From Topology) | T: CRISPR transcript (pre-crRNA) processing endoribonuclease-related | F: PF08798 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.70.1200 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Crispr-associated protein | CATH (4.3.0) |
A | 3.30.70.1210 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Crispr-associated protein | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08798 | CRISPR associated protein (CRISPR_assoc) | CRISPR associated protein | This domain forms an anti-parallel beta strand structure with flanking alpha helical regions. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
CRISPR-associated protein |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR010179 | CRISPR-associated protein Cse3 | Family |