1VZ0

Chromosome segregation protein Spo0J from Thermus thermophilus

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1vz0a1	All alpha proteins	DNA/RNA-binding 3-helical bundle	KorB DNA-binding domain-like	KorB DNA-binding domain-like	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
A	d1vz0a2	Alpha and beta proteins (a+b)	ParB/Sulfiredoxin	ParB/Sulfiredoxin	ParB-like nuclease domain	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
B	d1vz0b1	All alpha proteins	DNA/RNA-binding 3-helical bundle	KorB DNA-binding domain-like	KorB DNA-binding domain-like	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
B	d1vz0b2	Alpha and beta proteins (a+b)	ParB/Sulfiredoxin	ParB/Sulfiredoxin	ParB-like nuclease domain	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
C	d1vz0c1	All alpha proteins	DNA/RNA-binding 3-helical bundle	KorB DNA-binding domain-like	KorB DNA-binding domain-like	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
C	d1vz0c2	Alpha and beta proteins (a+b)	ParB/Sulfiredoxin	ParB/Sulfiredoxin	ParB-like nuclease domain	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
D	d1vz0d1	All alpha proteins	DNA/RNA-binding 3-helical bundle	KorB DNA-binding domain-like	KorB DNA-binding domain-like	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
D	d1vz0d2	Alpha and beta proteins (a+b)	ParB/Sulfiredoxin	ParB/Sulfiredoxin	ParB-like nuclease domain	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
E	d1vz0e1	All alpha proteins	DNA/RNA-binding 3-helical bundle	KorB DNA-binding domain-like	KorB DNA-binding domain-like	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
E	d1vz0e2	Alpha and beta proteins (a+b)	ParB/Sulfiredoxin	ParB/Sulfiredoxin	ParB-like nuclease domain	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
F	d1vz0f1	All alpha proteins	DNA/RNA-binding 3-helical bundle	KorB DNA-binding domain-like	KorB DNA-binding domain-like	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
F	d1vz0f2	Alpha and beta proteins (a+b)	ParB/Sulfiredoxin	ParB/Sulfiredoxin	ParB-like nuclease domain	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
G	d1vz0g1	All alpha proteins	DNA/RNA-binding 3-helical bundle	KorB DNA-binding domain-like	KorB DNA-binding domain-like	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
G	d1vz0g2	Alpha and beta proteins (a+b)	ParB/Sulfiredoxin	ParB/Sulfiredoxin	ParB-like nuclease domain	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
H	d1vz0h1	All alpha proteins	DNA/RNA-binding 3-helical bundle	KorB DNA-binding domain-like	KorB DNA-binding domain-like	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)
H	d1vz0h2	Alpha and beta proteins (a+b)	ParB/Sulfiredoxin	ParB/Sulfiredoxin	ParB-like nuclease domain	Putative partitioning protein ParB/Spo0J	(Thermus thermophilus HB27 ) [TaxId: 262724 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	ParB-like nuclease domain	8029177	4002475	SCOP2 (2022-06-29)
A	SCOP2 Family	KorB DNA-binding domain-like	8029176	4002305	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	ParB/Sulfiredoxin	8041556	3001301	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	KorB DNA-binding domain-like	8041555	3001083	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	ParB/Sulfiredoxin	8041556	3001301	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	KorB DNA-binding domain-like	8041555	3001083	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	ParB/Sulfiredoxin	8041556	3001301	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	KorB DNA-binding domain-like	8041555	3001083	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	ParB/Sulfiredoxin	8041556	3001301	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	KorB DNA-binding domain-like	8041555	3001083	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	ParB/Sulfiredoxin	8041556	3001301	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	KorB DNA-binding domain-like	8041555	3001083	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	ParB/Sulfiredoxin	8041556	3001301	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	KorB DNA-binding domain-like	8041555	3001083	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	KorB DNA-binding domain-like	8041555	3001083	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	ParB/Sulfiredoxin	8041556	3001301	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	ParB/Sulfiredoxin	8041556	3001301	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	KorB DNA-binding domain-like	8041555	3001083	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	HTH_38	e1vz0A2	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: HTH_38	ECOD (1.6)
A	nucleoid_noc	e1vz0A3	A: alpha arrays	X: KorB C-terminal domain-like	H: KorB C-terminal domain (From Topology)	T: KorB C-terminal domain	F: nucleoid_noc	ECOD (1.6)
A	ParBc	e1vz0A1	A: a+b complex topology	X: ParB/Sulfiredoxin (From Topology)	H: ParB/Sulfiredoxin (From Topology)	T: ParB/Sulfiredoxin	F: ParBc	ECOD (1.6)
B	HTH_38	e1vz0B1	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: HTH_38	ECOD (1.6)
B	nucleoid_noc	e1vz0B2	A: alpha arrays	X: KorB C-terminal domain-like	H: KorB C-terminal domain (From Topology)	T: KorB C-terminal domain	F: nucleoid_noc	ECOD (1.6)
B	ParBc	e1vz0B3	A: a+b complex topology	X: ParB/Sulfiredoxin (From Topology)	H: ParB/Sulfiredoxin (From Topology)	T: ParB/Sulfiredoxin	F: ParBc	ECOD (1.6)
C	HTH_38	e1vz0C1	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: HTH_38	ECOD (1.6)
C	nucleoid_noc	e1vz0C3	A: alpha arrays	X: KorB C-terminal domain-like	H: KorB C-terminal domain (From Topology)	T: KorB C-terminal domain	F: nucleoid_noc	ECOD (1.6)
C	ParBc	e1vz0C6	A: a+b complex topology	X: ParB/Sulfiredoxin (From Topology)	H: ParB/Sulfiredoxin (From Topology)	T: ParB/Sulfiredoxin	F: ParBc	ECOD (1.6)
D	HTH_38	e1vz0D1	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: HTH_38	ECOD (1.6)
D	nucleoid_noc	e1vz0D3	A: alpha arrays	X: KorB C-terminal domain-like	H: KorB C-terminal domain (From Topology)	T: KorB C-terminal domain	F: nucleoid_noc	ECOD (1.6)
D	ParBc	e1vz0D6	A: a+b complex topology	X: ParB/Sulfiredoxin (From Topology)	H: ParB/Sulfiredoxin (From Topology)	T: ParB/Sulfiredoxin	F: ParBc	ECOD (1.6)
E	HTH_38	e1vz0E1	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: HTH_38	ECOD (1.6)
E	nucleoid_noc	e1vz0E2	A: alpha arrays	X: KorB C-terminal domain-like	H: KorB C-terminal domain (From Topology)	T: KorB C-terminal domain	F: nucleoid_noc	ECOD (1.6)
E	ParBc	e1vz0E3	A: a+b complex topology	X: ParB/Sulfiredoxin (From Topology)	H: ParB/Sulfiredoxin (From Topology)	T: ParB/Sulfiredoxin	F: ParBc	ECOD (1.6)
F	HTH_38	e1vz0F1	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: HTH_38	ECOD (1.6)
F	nucleoid_noc	e1vz0F2	A: alpha arrays	X: KorB C-terminal domain-like	H: KorB C-terminal domain (From Topology)	T: KorB C-terminal domain	F: nucleoid_noc	ECOD (1.6)
F	ParBc	e1vz0F3	A: a+b complex topology	X: ParB/Sulfiredoxin (From Topology)	H: ParB/Sulfiredoxin (From Topology)	T: ParB/Sulfiredoxin	F: ParBc	ECOD (1.6)
G	HTH_38	e1vz0G1	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: HTH_38	ECOD (1.6)
G	nucleoid_noc	e1vz0G2	A: alpha arrays	X: KorB C-terminal domain-like	H: KorB C-terminal domain (From Topology)	T: KorB C-terminal domain	F: nucleoid_noc	ECOD (1.6)
G	ParBc	e1vz0G3	A: a+b complex topology	X: ParB/Sulfiredoxin (From Topology)	H: ParB/Sulfiredoxin (From Topology)	T: ParB/Sulfiredoxin	F: ParBc	ECOD (1.6)
H	HTH_38	e1vz0H1	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: HTH_38	ECOD (1.6)
H	nucleoid_noc	e1vz0H2	A: alpha arrays	X: KorB C-terminal domain-like	H: KorB C-terminal domain (From Topology)	T: KorB C-terminal domain	F: nucleoid_noc	ECOD (1.6)
H	ParBc	e1vz0H3	A: a+b complex topology	X: ParB/Sulfiredoxin (From Topology)	H: ParB/Sulfiredoxin (From Topology)	T: ParB/Sulfiredoxin	F: ParBc	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Provenance Source (Version)
A	3.90.1530.30	Alpha Beta	Alpha-Beta Complex	Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain	CATH (4.3.0)
A	1.10.10.2830	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	CATH (4.3.0)
B	3.90.1530.30	Alpha Beta	Alpha-Beta Complex	Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain	CATH (4.3.0)
B	1.10.10.2830	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	CATH (4.3.0)
C	3.90.1530.30	Alpha Beta	Alpha-Beta Complex	Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain	CATH (4.3.0)
C	1.10.10.2830	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	CATH (4.3.0)
D	3.90.1530.30	Alpha Beta	Alpha-Beta Complex	Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain	CATH (4.3.0)
D	1.10.10.2830	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	CATH (4.3.0)
E	3.90.1530.30	Alpha Beta	Alpha-Beta Complex	Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain	CATH (4.3.0)
E	1.10.10.2830	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	CATH (4.3.0)
F	3.90.1530.30	Alpha Beta	Alpha-Beta Complex	Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain	CATH (4.3.0)
F	1.10.10.2830	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	CATH (4.3.0)
G	3.90.1530.30	Alpha Beta	Alpha-Beta Complex	Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain	CATH (4.3.0)
G	1.10.10.2830	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	CATH (4.3.0)
H	3.90.1530.30	Alpha Beta	Alpha-Beta Complex	Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, ParB domain	CATH (4.3.0)
H	1.10.10.2830	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF02195	ParB/Sulfiredoxin domain (ParBc)	ParB/Sulfiredoxin domain	-	Family
A, B, C, D, E A, B, C, D, E, F, G, H	PF17762	HTH domain found in ParB protein (HTH_ParB)	HTH domain found in ParB protein	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	Chromosome-partitioning protein Spo0J	DNA binding binding organic cyclic compound binding nucleic acid binding	cellular process cell cycle chromosome segregation cell cycle process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR041468	ParB/Spo0J, HTH domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036086	ParB/Sulfiredoxin superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR004437	ParB/RepB/Spo0J partition protein	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR003115	ParB/Sulfiredoxin	Domain

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1VZ0

Chromosome segregation protein Spo0J from Thermus thermophilus

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage