1URZ
Low pH induced, membrane fusion conformation of the envelope protein of tick-borne encephalitis virus
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Class II viral fusion proteins C-terminal domain | 8054968 | 4007569 | SCOP2 (2022-06-29) |
A | SCOP2 Family | Viral glycoprotein central and dimerisation domains | 8055443 | 4003128 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | E set domains | 8054969 | 3000070 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Viral glycoprotein central and dimerisation domains | 8055444 | 3000293 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Viral glycoprotein central and dimerisation domains | 8055444 | 3000293 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | E set domains | 8054969 | 3000070 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Viral glycoprotein central and dimerisation domains | 8055444 | 3000293 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | E set domains | 8054969 | 3000070 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Viral glycoprotein central and dimerisation domains | 8055444 | 3000293 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | E set domains | 8054969 | 3000070 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Viral glycoprotein central and dimerisation domains | 8055444 | 3000293 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | E set domains | 8054969 | 3000070 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | E set domains | 8054969 | 3000070 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Viral glycoprotein central and dimerisation domains | 8055444 | 3000293 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Flavi_glycop_C | e1urzA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
A | Flavi_glycoprot | e1urzA2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Flavi_glycoprot | ECOD (1.6) |
B | Flavi_glycop_C | e1urzB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
B | Flavi_glycoprot | e1urzB2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Flavi_glycoprot | ECOD (1.6) |
C | Flavi_glycop_C | e1urzC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
C | Flavi_glycoprot | e1urzC2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Flavi_glycoprot | ECOD (1.6) |
D | Flavi_glycop_C | e1urzD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
D | Flavi_glycoprot | e1urzD2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Flavi_glycoprot | ECOD (1.6) |
E | Flavi_glycop_C | e1urzE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
E | Flavi_glycoprot | e1urzE2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Flavi_glycoprot | ECOD (1.6) |
F | Flavi_glycop_C | e1urzF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Flavi_glycop_C | ECOD (1.6) |
F | Flavi_glycoprot | e1urzF2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: Flavi_glycoprot | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00869 | Flavivirus glycoprotein, central and dimerisation domains (Flavi_glycoprot) | Flavivirus glycoprotein, central and dimerisation domains | - | Domain | |
PF21659 | Flavivirus envelope glycoprotein E, stem/anchor domain (Flavi_E_stem) | Flavivirus envelope glycoprotein E, stem/anchor domain | This entry represents the stem/anchor domain found at the C-terminal of envelope glycoprotein E from Flavivirus. This domain comprises a stem region followed by two transmembrane anchor domains [1-5]. | Domain | |
PF02832 | Flavivirus glycoprotein, immunoglobulin-like domain (Flavi_glycop_C) | Flavivirus glycoprotein, immunoglobulin-like domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Bitopic proteins | Viral membrane fusion glycoprotein | Flavivirus glycoprotein |