1RYL

The Crystal Structure of a Protein of Unknown Function YfbM from Escherichia coli

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1ryla_	Alpha and beta proteins (a+b)	Hypothetical protein yfbM	Hypothetical protein yfbM	Hypothetical protein yfbM	Hypothetical protein yfbM	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)
B	d1rylb_	Alpha and beta proteins (a+b)	Hypothetical protein yfbM	Hypothetical protein yfbM	Hypothetical protein yfbM	Hypothetical protein yfbM	(Escherichia coli ) [TaxId: 562 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Hypothetical protein yfbM	8026611	4002655	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YfbM-like	8038990	3001558	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	YfbM-like	8038990	3001558	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF08974	e1rylA1	A: a+b complex topology	X: DNA mimic protein DMP12-like	H: DNA mimic protein DMP12-related (From Topology)	T: DNA mimic protein DMP12-related	F: PF08974	ECOD (1.6)
B	PF08974	e1rylB1	A: a+b complex topology	X: DNA mimic protein DMP12-like	H: DNA mimic protein DMP12-related (From Topology)	T: DNA mimic protein DMP12-related	F: PF08974	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.1760.10	Alpha Beta	3-Layer(aba) Sandwich	Hypothetical protein yfbM fold	YfbM-like super family	CATH (4.3.0)
B	3.40.1760.10	Alpha Beta	3-Layer(aba) Sandwich	Hypothetical protein yfbM fold	YfbM-like super family	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF08974	Domain of unknown function (DUF1877) (DUF1877)	Domain of unknown function (DUF1877)	This domain is found in a set of hypothetical bacterial proteins.	Domain

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR015068	Protein of unknown function DUF1877	Family
A, B	IPR035944	YfbM-like super family	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.