1RYL | pdb_00001ryl

The Crystal Structure of a Protein of Unknown Function YfbM from Escherichia coli

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd1rylb_ Alpha and beta proteins (a+b) Hypothetical protein yfbM Hypothetical protein yfbM Hypothetical protein yfbM Hypothetical protein yfbM (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)
Ad1ryla_ Alpha and beta proteins (a+b) Hypothetical protein yfbM Hypothetical protein yfbM Hypothetical protein yfbM Hypothetical protein yfbM (Escherichia coli ) [TaxId: 562 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyYfbM-like 8038990 3001558 SCOP2B (2022-06-29)
ASCOP2 FamilyHypothetical protein yfbM 8026611 4002655 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyYfbM-like 8038990 3001558 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BDUF1877e1rylB1 A: a+b complex topologyX: DNA mimic protein DMP12-likeH: DNA mimic protein DMP12-related (From Topology)T: DNA mimic protein DMP12-relatedF: DUF1877ECOD (1.6)
ADUF1877e1rylA1 A: a+b complex topologyX: DNA mimic protein DMP12-likeH: DNA mimic protein DMP12-related (From Topology)T: DNA mimic protein DMP12-relatedF: DUF1877ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.1760.10 Alpha Beta 3-Layer(aba) Sandwich Hypothetical protein yfbM fold YfbM-like super familyCATH (4.3.0)
A3.40.1760.10 Alpha Beta 3-Layer(aba) Sandwich Hypothetical protein yfbM fold YfbM-like super familyCATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR015068Protein of unknown function DUF1877Family
A, B
IPR035944YfbM-like super familyHomologous Superfamily