1RJ7
Crystal structure of EDA-A1
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
E [auth F] | SCOP2B Superfamily | TNF-like | 8040692 | 3000061 | SCOP2B (2022-06-29) |
J [auth K] | SCOP2B Superfamily | TNF-like | 8040692 | 3000061 | SCOP2B (2022-06-29) |
L [auth M] | SCOP2B Superfamily | TNF-like | 8040692 | 3000061 | SCOP2B (2022-06-29) |
A | SCOP2 Family | TNF-like | 8028313 | 4000294 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | TNF-like | 8040692 | 3000061 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | TNF-like | 8040692 | 3000061 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | TNF-like | 8040692 | 3000061 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | TNF-like | 8040692 | 3000061 | SCOP2B (2022-06-29) |
F [auth G] | SCOP2B Superfamily | TNF-like | 8040692 | 3000061 | SCOP2B (2022-06-29) |
G [auth H] | SCOP2B Superfamily | TNF-like | 8040692 | 3000061 | SCOP2B (2022-06-29) |
H [auth I] | SCOP2B Superfamily | TNF-like | 8040692 | 3000061 | SCOP2B (2022-06-29) |
I [auth J] | SCOP2B Superfamily | TNF-like | 8040692 | 3000061 | SCOP2B (2022-06-29) |
K [auth L] | SCOP2B Superfamily | TNF-like | 8040692 | 3000061 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth F] | PF00229 | e1rj7F1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: PF00229 | ECOD (1.6) |
J [auth K] | PF00229 | e1rj7K1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: PF00229 | ECOD (1.6) |
L [auth M] | PF00229 | e1rj7M1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: PF00229 | ECOD (1.6) |
A | PF00229 | e1rj7A1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: PF00229 | ECOD (1.6) |
B | PF00229 | e1rj7B1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: PF00229 | ECOD (1.6) |
C [auth D] | PF00229 | e1rj7D1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: PF00229 | ECOD (1.6) |
D [auth E] | PF00229 | e1rj7E1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: PF00229 | ECOD (1.6) |
F [auth G] | PF00229 | e1rj7G1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: PF00229 | ECOD (1.6) |
G [auth H] | PF00229 | e1rj7H1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: PF00229 | ECOD (1.6) |
H [auth I] | PF00229 | e1rj7I1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: PF00229 | ECOD (1.6) |
I [auth J] | PF00229 | e1rj7J1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: PF00229 | ECOD (1.6) |
K [auth L] | PF00229 | e1rj7L1 | A: beta sandwiches | X: jelly-roll | H: TNF-like (From Topology) | T: TNF-like | F: PF00229 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
E [auth F] | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
J [auth K] | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
L [auth M] | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
A | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
B | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
C [auth D] | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
D [auth E] | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
F [auth G] | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
G [auth H] | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
H [auth I] | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
I [auth J] | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
K [auth L] | 2.60.120.40 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00229 | TNF(Tumour Necrosis Factor) family (TNF) | TNF(Tumour Necrosis Factor) family | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR008983 | Tumour necrosis factor-like domain superfamily | Homologous Superfamily | |
IPR006052 | Tumour necrosis factor domain | Domain |