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Crystal Structure of Thermotoga maritima 1070


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B Superfamilyhypothetical protein tm1070 8033237 3001747 SCOP2B (2022-06-29)
CSCOP2B Superfamilyhypothetical protein tm1070 8033237 3001747 SCOP2B (2022-06-29)
BSCOP2B Superfamilyhypothetical protein tm1070 8033237 3001747 SCOP2B (2022-06-29)
ASCOP2 Familyhypothetical protein tm1070 8020857 4003896 SCOP2 (2022-06-29)
ASCOP2 Superfamilyhypothetical protein tm1070 8033237 3001747 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DCopper-binde1nc7D1 A: alpha arraysX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: Copper-bindECOD (v295.2)
CCopper-binde1nc7C1 A: alpha arraysX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: Copper-bindECOD (v295.2)
BCopper-binde1nc7B1 A: alpha arraysX: Phage tail fiber protein trimerization domainH: Phage tail fiber protein trimerization domainT: Phage tail fiber protein trimerization domainF: Copper-bindECOD (v295.2)
AASRTe1nc7A1 A: beta sandwichesX: jelly-rollH: Hypothetical protein TM1070T: Hypothetical protein TM1070F: ASRTECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D2.60.290.11 Mainly Beta Sandwich Hypothetical Protein Tm1070 Chain: ACATH (4.3.0)
C2.60.290.11 Mainly Beta Sandwich Hypothetical Protein Tm1070 Chain: ACATH (4.3.0)
B2.60.290.11 Mainly Beta Sandwich Hypothetical Protein Tm1070 Chain: ACATH (4.3.0)
A2.60.290.11 Mainly Beta Sandwich Hypothetical Protein Tm1070 Chain: ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF07100Anabaena sensory rhodopsin transducer (ASRT)Anabaena sensory rhodopsin transducerThe family of bacterial Anabaena sensory rhodopsin transducers are likely to bind sugars or related metabolites. The entire protein is comprised of a single globular domain with an eight-stranded beta-sandwich fold. There are a few characteristics wh ...The family of bacterial Anabaena sensory rhodopsin transducers are likely to bind sugars or related metabolites. The entire protein is comprised of a single globular domain with an eight-stranded beta-sandwich fold. There are a few characteristics which define this beta-sandwich fold as being distinct from other so-named folds, and these are: 1) a well conserved tryptophan, usually following a polar residue, present at the start of the first strand; this tryptophan appears to be central to a hydrophobic interaction required to hold the two beta-sheets of the sandwich together, and 2) a nearly absolutely conserved asparagine located at the end of the second beta-strand, that hydrogen bonds with the backbone carbonyls of the residues 2 and 4 positions downstream from it, thereby stabilising the characteristic tight turn between strands 2 and 3 of the structure.
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR009794Anabaena sensory rhodopsin transducerFamily
A, B, C, D
IPR036698TM1070-like superfamilyHomologous Superfamily