Annotations: 1JRO

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d1jrod1	Alpha and beta proteins (a+b)	alpha/beta-Hammerhead	CO dehydrogenase molybdoprotein N-domain-like	CO dehydrogenase molybdoprotein N-domain-like	Xanthine dehydrogenase chain B, N-terminal domain	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
D	d1jrod2	Alpha and beta proteins (a+b)	Molybdenum cofactor-binding domain	Molybdenum cofactor-binding domain	Molybdenum cofactor-binding domain	Xanthine dehydrogenase chain B, C-terminal domain	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
H	d1jroh1	Alpha and beta proteins (a+b)	alpha/beta-Hammerhead	CO dehydrogenase molybdoprotein N-domain-like	CO dehydrogenase molybdoprotein N-domain-like	Xanthine dehydrogenase chain B, N-terminal domain	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
H	d1jroh2	Alpha and beta proteins (a+b)	Molybdenum cofactor-binding domain	Molybdenum cofactor-binding domain	Molybdenum cofactor-binding domain	Xanthine dehydrogenase chain B, C-terminal domain	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
F	d1jrof1	Alpha and beta proteins (a+b)	alpha/beta-Hammerhead	CO dehydrogenase molybdoprotein N-domain-like	CO dehydrogenase molybdoprotein N-domain-like	Xanthine dehydrogenase chain B, N-terminal domain	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
F	d1jrof2	Alpha and beta proteins (a+b)	Molybdenum cofactor-binding domain	Molybdenum cofactor-binding domain	Molybdenum cofactor-binding domain	Xanthine dehydrogenase chain B, C-terminal domain	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
B	d1jrob1	Alpha and beta proteins (a+b)	alpha/beta-Hammerhead	CO dehydrogenase molybdoprotein N-domain-like	CO dehydrogenase molybdoprotein N-domain-like	Xanthine dehydrogenase chain B, N-terminal domain	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
B	d1jrob2	Alpha and beta proteins (a+b)	Molybdenum cofactor-binding domain	Molybdenum cofactor-binding domain	Molybdenum cofactor-binding domain	Xanthine dehydrogenase chain B, C-terminal domain	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
A	d1jroa1	All alpha proteins	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	Xanthine dehydrogenase chain A, domain 2	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
A	d1jroa2	Alpha and beta proteins (a+b)	beta-Grasp (ubiquitin-like)	2Fe-2S ferredoxin-like	2Fe-2S ferredoxin domains from multidomain proteins	Xanthine dehydrogenase chain A, N-terminal domain	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
A	d1jroa3	Alpha and beta proteins (a+b)	CO dehydrogenase flavoprotein C-domain-like	CO dehydrogenase flavoprotein C-terminal domain-like	CO dehydrogenase flavoprotein C-terminal domain-like	Xanthine dehydrogenase chain A, domain 4	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
A	d1jroa4	Alpha and beta proteins (a+b)	FAD-binding/transporter-associated domain-like	FAD-binding/transporter-associated domain-like	CO dehydrogenase flavoprotein N-terminal domain-like	Xanthine dehydrogenase chain A, domain 3	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
G	d1jrog1	All alpha proteins	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	Xanthine dehydrogenase chain A, domain 2	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
G	d1jrog2	Alpha and beta proteins (a+b)	beta-Grasp (ubiquitin-like)	2Fe-2S ferredoxin-like	2Fe-2S ferredoxin domains from multidomain proteins	Xanthine dehydrogenase chain A, N-terminal domain	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
G	d1jrog3	Alpha and beta proteins (a+b)	CO dehydrogenase flavoprotein C-domain-like	CO dehydrogenase flavoprotein C-terminal domain-like	CO dehydrogenase flavoprotein C-terminal domain-like	Xanthine dehydrogenase chain A, domain 4	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
G	d1jrog4	Alpha and beta proteins (a+b)	FAD-binding/transporter-associated domain-like	FAD-binding/transporter-associated domain-like	CO dehydrogenase flavoprotein N-terminal domain-like	Xanthine dehydrogenase chain A, domain 3	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
E	d1jroe1	All alpha proteins	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	Xanthine dehydrogenase chain A, domain 2	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
E	d1jroe2	Alpha and beta proteins (a+b)	beta-Grasp (ubiquitin-like)	2Fe-2S ferredoxin-like	2Fe-2S ferredoxin domains from multidomain proteins	Xanthine dehydrogenase chain A, N-terminal domain	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
E	d1jroe3	Alpha and beta proteins (a+b)	CO dehydrogenase flavoprotein C-domain-like	CO dehydrogenase flavoprotein C-terminal domain-like	CO dehydrogenase flavoprotein C-terminal domain-like	Xanthine dehydrogenase chain A, domain 4	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
E	d1jroe4	Alpha and beta proteins (a+b)	FAD-binding/transporter-associated domain-like	FAD-binding/transporter-associated domain-like	CO dehydrogenase flavoprotein N-terminal domain-like	Xanthine dehydrogenase chain A, domain 3	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
C	d1jroc1	All alpha proteins	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	CO dehydrogenase ISP C-domain like	Xanthine dehydrogenase chain A, domain 2	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
C	d1jroc2	Alpha and beta proteins (a+b)	beta-Grasp (ubiquitin-like)	2Fe-2S ferredoxin-like	2Fe-2S ferredoxin domains from multidomain proteins	Xanthine dehydrogenase chain A, N-terminal domain	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
C	d1jroc3	Alpha and beta proteins (a+b)	CO dehydrogenase flavoprotein C-domain-like	CO dehydrogenase flavoprotein C-terminal domain-like	CO dehydrogenase flavoprotein C-terminal domain-like	Xanthine dehydrogenase chain A, domain 4	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)
C	d1jroc4	Alpha and beta proteins (a+b)	FAD-binding/transporter-associated domain-like	FAD-binding/transporter-associated domain-like	CO dehydrogenase flavoprotein N-terminal domain-like	Xanthine dehydrogenase chain A, domain 3	(Rhodobacter capsulatus ) [TaxId: 1061 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	CO dehydrogenase molybdoprotein N-domain-like	8037296	3000847	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Molybdenum cofactor-binding domain	8037297	3000625	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Molybdenum cofactor-binding domain	8037297	3000625	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	CO dehydrogenase molybdoprotein N-domain-like	8037296	3000847	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	CO dehydrogenase molybdoprotein N-domain-like	8037296	3000847	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Molybdenum cofactor-binding domain	8037297	3000625	SCOP2B (2022-06-29)
B	SCOP2 Family	CO dehydrogenase molybdoprotein N-domain-like	8024917	4001129	SCOP2 (2022-06-29)
B	SCOP2 Family	Molybdenum cofactor-binding domain	8024918	4001972	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	CO dehydrogenase molybdoprotein N-domain-like	8037296	3000847	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Molybdenum cofactor-binding domain	8037297	3000625	SCOP2 (2022-06-29)
A	SCOP2 Family	CO dehydrogenase ISP C-domain like	8024908	4001010	SCOP2 (2022-06-29)
A	SCOP2 Family	2Fe-2S ferredoxin domains from multidomain proteins	8024911	4000241	SCOP2 (2022-06-29)
A	SCOP2 Family	CO dehydrogenase flavoprotein C-terminal domain-like	8024914	4001591	SCOP2 (2022-06-29)
A	SCOP2 Family	CO dehydrogenase flavoprotein N-terminal domain-like	8024915	4002187	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	CO dehydrogenase ISP C-domain like	8037287	3000439	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	2Fe-2S ferredoxin-like	8037290	3000113	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	CO dehydrogenase flavoprotein C-terminal domain-like	8037293	3001921	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	FAD-binding/transporter-associated domain-like	8037294	3000913	SCOP2 (2022-06-29)
G	SCOP2B Superfamily	CO dehydrogenase flavoprotein C-terminal domain-like	8037293	3001921	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	CO dehydrogenase ISP C-domain like	8037287	3000439	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	FAD-binding/transporter-associated domain-like	8037294	3000913	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	2Fe-2S ferredoxin-like	8037290	3000113	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	CO dehydrogenase ISP C-domain like	8037287	3000439	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	FAD-binding/transporter-associated domain-like	8037294	3000913	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	2Fe-2S ferredoxin-like	8037290	3000113	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	CO dehydrogenase flavoprotein C-terminal domain-like	8037293	3001921	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	CO dehydrogenase flavoprotein C-terminal domain-like	8037293	3001921	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	CO dehydrogenase ISP C-domain like	8037287	3000439	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	2Fe-2S ferredoxin-like	8037290	3000113	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	FAD-binding/transporter-associated domain-like	8037294	3000913	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Biotin_carb_C	e1jroD2	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: Biotin_carb_C	ECOD (develop294)
D	Glycogen_syn	e1jroD3	A: alpha bundles	X: omega toxin-like	H: omega toxin-related	T: omega toxin-related	F: Glycogen_syn	ECOD (develop294)
H	Biotin_carb_C	e1jroH2	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: Biotin_carb_C	ECOD (develop294)
H	Glycogen_syn	e1jroH3	A: alpha bundles	X: omega toxin-like	H: omega toxin-related	T: omega toxin-related	F: Glycogen_syn	ECOD (develop294)
F	Biotin_carb_C	e1jroF2	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: Biotin_carb_C	ECOD (develop294)
F	Glycogen_syn	e1jroF3	A: alpha bundles	X: omega toxin-like	H: omega toxin-related	T: omega toxin-related	F: Glycogen_syn	ECOD (develop294)
B	Ald_Xan_dh_C	e1jroB2	A: few secondary structure elements	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: CO dehydrogenase molybdoprotein N-domain-like	F: Ald_Xan_dh_C	ECOD (develop294)
B	Glycogen_syn	e1jroB3	A: alpha bundles	X: omega toxin-like	H: omega toxin-related	T: omega toxin-related	F: Glycogen_syn	ECOD (develop294)
A	CO_deh_flav_C	e1jroA3	A: a+b two layers	X: FAD-linked reductases, C-terminal domain-like	H: SufE/NifU	T: SufE/NifU	F: CO_deh_flav_C	ECOD (develop294)
A	FAD_binding_5	e1jroA4	A: beta duplicates or obligate multimers	X: FAD-binding domain-like	H: FAD-binding domain	T: FAD-binding domain	F: FAD_binding_5	ECOD (develop294)
A	SBP_bac_1	e1jroA5	A: alpha bundles	X: amino-terminal domain of OmpATb	H: amino-terminal domain of OmpATb	T: amino-terminal domain of OmpATb	F: SBP_bac_1	ECOD (develop294)
G	SBP_bac_1	e1jroG1	A: alpha bundles	X: amino-terminal domain of OmpATb	H: amino-terminal domain of OmpATb	T: amino-terminal domain of OmpATb	F: SBP_bac_1	ECOD (develop294)
E	SBP_bac_1	e1jroE1	A: alpha bundles	X: amino-terminal domain of OmpATb	H: amino-terminal domain of OmpATb	T: amino-terminal domain of OmpATb	F: SBP_bac_1	ECOD (develop294)
C	SBP_bac_1	e1jroC1	A: alpha bundles	X: amino-terminal domain of OmpATb	H: amino-terminal domain of OmpATb	T: amino-terminal domain of OmpATb	F: SBP_bac_1	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.90.1170.50	Alpha Beta	Alpha-Beta Complex	Aldehyde Oxidoreductase	domain 3	CATH (4.3.0)
D	3.30.365.10	Alpha Beta	2-Layer Sandwich	Aldehyde Oxidoreductase	domain 4	CATH (4.3.0)
H	3.90.1170.50	Alpha Beta	Alpha-Beta Complex	Aldehyde Oxidoreductase	domain 3	CATH (4.3.0)
H	3.30.365.10	Alpha Beta	2-Layer Sandwich	Aldehyde Oxidoreductase	domain 4	CATH (4.3.0)
F	3.90.1170.50	Alpha Beta	Alpha-Beta Complex	Aldehyde Oxidoreductase	domain 3	CATH (4.3.0)
F	3.30.365.10	Alpha Beta	2-Layer Sandwich	Aldehyde Oxidoreductase	domain 4	CATH (4.3.0)
B	3.90.1170.50	Alpha Beta	Alpha-Beta Complex	Aldehyde Oxidoreductase	domain 3	CATH (4.3.0)
B	3.30.365.10	Alpha Beta	2-Layer Sandwich	Aldehyde Oxidoreductase	domain 4	CATH (4.3.0)
A	3.10.20.30	Alpha Beta	Roll	Ubiquitin-like (UB roll)	Beta-grasp domain	CATH (4.3.0)
A	1.10.150.120	Mainly Alpha	Orthogonal Bundle	DNA polymerase	domain 1	CATH (4.3.0)
A	3.30.43.10	Alpha Beta	2-Layer Sandwich	Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase	domain 2	CATH (4.3.0)
A	3.30.465.10	Alpha Beta	2-Layer Sandwich	Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase	domain 3	CATH (4.3.0)
A	3.30.390.50	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
G	3.10.20.30	Alpha Beta	Roll	Ubiquitin-like (UB roll)	Beta-grasp domain	CATH (4.3.0)
G	1.10.150.120	Mainly Alpha	Orthogonal Bundle	DNA polymerase	domain 1	CATH (4.3.0)
G	3.30.43.10	Alpha Beta	2-Layer Sandwich	Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase	domain 2	CATH (4.3.0)
G	3.30.465.10	Alpha Beta	2-Layer Sandwich	Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase	domain 3	CATH (4.3.0)
G	3.30.390.50	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
E	3.10.20.30	Alpha Beta	Roll	Ubiquitin-like (UB roll)	Beta-grasp domain	CATH (4.3.0)
E	1.10.150.120	Mainly Alpha	Orthogonal Bundle	DNA polymerase	domain 1	CATH (4.3.0)
E	3.30.43.10	Alpha Beta	2-Layer Sandwich	Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase	domain 2	CATH (4.3.0)
E	3.30.465.10	Alpha Beta	2-Layer Sandwich	Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase	domain 3	CATH (4.3.0)
E	3.30.390.50	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
C	3.10.20.30	Alpha Beta	Roll	Ubiquitin-like (UB roll)	Beta-grasp domain	CATH (4.3.0)
C	1.10.150.120	Mainly Alpha	Orthogonal Bundle	DNA polymerase	domain 1	CATH (4.3.0)
C	3.30.43.10	Alpha Beta	2-Layer Sandwich	Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase	domain 2	CATH (4.3.0)
C	3.30.465.10	Alpha Beta	2-Layer Sandwich	Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase	domain 3	CATH (4.3.0)
C	3.30.390.50	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B, D, F, H	xanthine dehydrogenase, chain B	oxidoreductase activity catalytic activity cation binding transition metal ion binding molybdenum ion binding ion binding binding metal ion binding small molecule binding iron-sulfur cluster binding 2 iron, 2 sulfur cluster binding metal cluster binding iron ion binding	-	-
A, C, E, G	xanthine dehydrogenase, chain A	iron-sulfur cluster binding 2 iron, 2 sulfur cluster binding binding metal cluster binding small molecule binding FAD binding flavin adenine dinucleotide binding nucleoside phosphate binding ion binding anion binding nucleotide binding heterocyclic compound binding cation binding transition metal ion binding iron-sulfur cluster binding 2 iron, 2 sulfur cluster binding binding metal cluster binding small molecule binding FAD binding flavin adenine dinucleotide binding nucleoside phosphate binding ion binding anion binding nucleotide binding heterocyclic compound binding cation binding transition metal ion binding iron ion binding metal ion binding oxidoreductase activity oxidoreductase activity, acting on CH or CH2 groups oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor xanthine dehydrogenase activity catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B, D, F, H	IPR046867	Aldehyde oxidase/xanthine dehydrogenase, second molybdopterin binding domain	Domain
B, D, F, H	IPR000674	Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead	Domain
B, D, F, H	IPR014309	Xanthine dehydrogenase, molybdopterin binding subunit	Domain
B, D, F, H	IPR016208	Aldehyde oxidase/xanthine dehydrogenase-like	Family
B, D, F, H	IPR036856	Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily	Homologous Superfamily
B, D, F, H	IPR037165	Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily	Homologous Superfamily
B, D, F, H	IPR008274	Aldehyde oxidase/xanthine dehydrogenase, first molybdopterin binding domain	Domain
A, C, E, G	IPR016167	FAD-binding, type PCMH, subdomain 1	Homologous Superfamily
A, C, E, G	IPR036683	CO dehydrogenase flavoprotein, C-terminal domain superfamily	Homologous Superfamily
A, C, E, G	IPR012175	Xanthine dehydrogenase, small subunit, bacteria	Family
A, C, E, G	IPR036010	2Fe-2S ferredoxin-like superfamily	Homologous Superfamily
A, C, E, G	IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	Domain
A, C, E, G	IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	Binding Site
A, C, E, G	IPR016166	FAD-binding domain, PCMH-type	Domain
A, C, E, G	IPR002346	Molybdopterin dehydrogenase, FAD-binding	Domain
A, C, E, G	IPR014307	Xanthine dehydrogenase, small subunit	Domain
A, C, E, G	IPR002888	[2Fe-2S]-binding	Domain
A, C, E, G	IPR036318	FAD-binding, type PCMH-like superfamily	Homologous Superfamily
A, C, E, G	IPR016169	FAD-binding, type PCMH, subdomain 2	Homologous Superfamily
A, C, E, G	IPR036884	[2Fe-2S]-binding domain superfamily	Homologous Superfamily
A, C, E, G	IPR016208	Aldehyde oxidase/xanthine dehydrogenase-like	Family
A, C, E, G	IPR012675	Beta-grasp domain superfamily	Homologous Superfamily
A, C, E, G	IPR005107	CO dehydrogenase flavoprotein, C-terminal	Domain