1EL6 | pdb_00001el6

STRUCTURE OF BACTERIOPHAGE T4 GENE PRODUCT 11, THE INTERFACE BETWEEN THE BASEPLATE AND SHORT TAIL FIBERS

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d1el6c_	Alpha and beta proteins (a+b)	Baseplate structural protein gp11	Baseplate structural protein gp11	Baseplate structural protein gp11	Baseplate structural protein gp11	(Tequatrovirus T4 ) [TaxId: 10665 ],	SCOPe (2.08)
B	d1el6b_	Alpha and beta proteins (a+b)	Baseplate structural protein gp11	Baseplate structural protein gp11	Baseplate structural protein gp11	Baseplate structural protein gp11	(Tequatrovirus T4 ) [TaxId: 10665 ],	SCOPe (2.08)
A	d1el6a_	Alpha and beta proteins (a+b)	Baseplate structural protein gp11	Baseplate structural protein gp11	Baseplate structural protein gp11	Baseplate structural protein gp11	(Tequatrovirus T4 ) [TaxId: 10665 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	Baseplate structural protein gp11	8037280	3001519	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Baseplate structural protein gp11	8037280	3001519	SCOP2B (2022-06-29)
A	SCOP2 Family	Baseplate structural protein gp11	8024901	4002631	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Baseplate structural protein gp11	8037280	3001519	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	SBP_bac_5	e1el6C1	A: alpha bundles	X: EGF-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: SBP_bac_5	ECOD (develop294)
C	Rubrerythrin	e1el6C2	A: alpha bundles	X: Repetitive alpha hairpins	H: ARM repeat	T: ARM repeat	F: Rubrerythrin	ECOD (develop294)
B	SBP_bac_5	e1el6B1	A: alpha bundles	X: EGF-like	H: General secretion pathway protein M (EpsM) periplasmic domain-related	T: General secretion pathway protein M (EpsM) periplasmic domain-related	F: SBP_bac_5	ECOD (develop294)
B	Rubrerythrin	e1el6B2	A: alpha bundles	X: Repetitive alpha hairpins	H: ARM repeat	T: ARM repeat	F: Rubrerythrin	ECOD (develop294)
A	GP11	e1el6A1	A: a+b two layers	X: Alpha-beta plaits	H: gp11/flagellar cap protein FliD insertion domain	T: gp11/flagellar cap protein FliD insertion domain	F: GP11	ECOD (develop294)
A	Rubrerythrin	e1el6A2	A: alpha bundles	X: Repetitive alpha hairpins	H: ARM repeat	T: ARM repeat	F: Rubrerythrin	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	1.10.286.30	Mainly Alpha	Orthogonal Bundle	GTP Cyclohydrolase I	Chain A, domain 1	CATH (4.3.0)
C	2.20.20.20	Mainly Beta	Single Sheet	Anthopleurin-A	Baseplate structural protein gp11, C-terminal domain	CATH (4.3.0)
C	3.90.1160.10	Alpha Beta	Alpha-Beta Complex	Baseplate Structural Protein Gp11	Chain: A, domain 3	CATH (4.3.0)
B	1.10.286.30	Mainly Alpha	Orthogonal Bundle	GTP Cyclohydrolase I	Chain A, domain 1	CATH (4.3.0)
B	2.20.20.20	Mainly Beta	Single Sheet	Anthopleurin-A	Baseplate structural protein gp11, C-terminal domain	CATH (4.3.0)
B	3.90.1160.10	Alpha Beta	Alpha-Beta Complex	Baseplate Structural Protein Gp11	Chain: A, domain 3	CATH (4.3.0)
A	1.10.286.30	Mainly Alpha	Orthogonal Bundle	GTP Cyclohydrolase I	Chain A, domain 1	CATH (4.3.0)
A	2.20.20.20	Mainly Beta	Single Sheet	Anthopleurin-A	Baseplate structural protein gp11, C-terminal domain	CATH (4.3.0)
A	3.90.1160.10	Alpha Beta	Alpha-Beta Complex	Baseplate Structural Protein Gp11	Chain: A, domain 3	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	BASEPLATE STRUCTURAL PROTEIN GP11	-	virion assembly viral tail assembly viral process viral life cycle	virus tail virion component virus tail, baseplate

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR015982	Baseplate structural protein Gp11, N-terminal domain superfamily	Homologous Superfamily
A, B, C	IPR015976	Bacteriophage T4, Gp11, C-terminal finger domain	Homologous Superfamily
A, B, C	IPR043180	Baseplate structural protein Gp11, C-terminal domain	Homologous Superfamily
A, B, C	IPR014791	Baseplate structural protein Gp11	Family
A, B, C	IPR036214	Baseplate structural protein Gp11 superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.