1ZZI
Crystal Structure Analysis of the third KH domain of hnRNP K in complex with ssDNA
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | d1zzia2 | Alpha and beta proteins (a+b) | Eukaryotic type KH-domain (KH-domain type I) | Eukaryotic type KH-domain (KH-domain type I) | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth A] | d1zzia3 | Artifacts | Tags | Tags | Tags | N-terminal Tags | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D [auth B] | d1zzib_ | Alpha and beta proteins (a+b) | Eukaryotic type KH-domain (KH-domain type I) | Eukaryotic type KH-domain (KH-domain type I) | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
C [auth A] | SCOP2B Superfamily | Eukaryotic type KH-domain (KH-domain type I) | 8036456 | 3001023 | SCOP2B (2022-06-29) |
D [auth B] | SCOP2B Superfamily | Eukaryotic type KH-domain (KH-domain type I) | 8036456 | 3001023 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C [auth A] | KH_1_1 | e1zziA1 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Eukaryotic type KH-domain (KH-domain type I) | F: KH_1_1 | ECOD (1.6) |
D [auth B] | KH_1_1 | e1zziB1 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Eukaryotic type KH-domain (KH-domain type I) | F: KH_1_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
C [auth A] | 3.30.1370.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S8 | Chain: A, domain 1 | CATH (4.3.0) |
D [auth B] | 3.30.1370.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S8 | Chain: A, domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
C [auth A], D [auth B] | PF00013 | KH domain (KH_1) | KH domain | KH motifs bind RNA in vitro. Autoantibodies to Nova, a KH domain protein, cause paraneoplastic opsoclonus ataxia. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
C [auth A], D [auth B] | IPR004087 | K Homology domain | Domain |
C [auth A], D [auth B] | IPR012987 | ROK, N-terminal | Domain |
C [auth A], D [auth B] | IPR036612 | K Homology domain, type 1 superfamily | Homologous Superfamily |
C [auth A], D [auth B] | IPR004088 | K Homology domain, type 1 | Domain |