1ZRU | pdb_00001zru

structure of the lactophage p2 receptor binding protein in complex with glycerol


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Cd1zruc1 All beta proteins Virus attachment protein globular domain Virus attachment protein globular domain Lactophage receptor-binding protein head domain receptor binding protein, rbp, C-terminal domain (Lactococcus virus P2 ) [TaxId: 254252 ], SCOPe (2.08)
Cd1zruc2 All beta proteins Triple-stranded beta-helix Phage fibre proteins Lactophage receptor-binding protein domain Receptor binding protein, rbp, middle domain (Lactococcus virus P2 ) [TaxId: 254252 ], SCOPe (2.08)
Cd1zruc3 All beta proteins Pseudo beta-prism I Bacteriophage trimeric proteins domain Lactophage receptor-binding protein N-terminal domain Receptor binding protein, rbp, N-terminal domain (Lactococcus virus P2 ) [TaxId: 254252 ], SCOPe (2.08)
Bd1zrub1 All beta proteins Virus attachment protein globular domain Virus attachment protein globular domain Lactophage receptor-binding protein head domain receptor binding protein, rbp, C-terminal domain (Lactococcus virus P2 ) [TaxId: 254252 ], SCOPe (2.08)
Bd1zrub2 All beta proteins Triple-stranded beta-helix Phage fibre proteins Lactophage receptor-binding protein domain Receptor binding protein, rbp, middle domain (Lactococcus virus P2 ) [TaxId: 254252 ], SCOPe (2.08)
Bd1zrub3 All beta proteins Pseudo beta-prism I Bacteriophage trimeric proteins domain Lactophage receptor-binding protein N-terminal domain Receptor binding protein, rbp, N-terminal domain (Lactococcus virus P2 ) [TaxId: 254252 ], SCOPe (2.08)
Ad1zrua1 All beta proteins Virus attachment protein globular domain Virus attachment protein globular domain Lactophage receptor-binding protein head domain receptor binding protein, rbp, C-terminal domain (Lactococcus virus P2 ) [TaxId: 254252 ], SCOPe (2.08)
Ad1zrua2 All beta proteins Triple-stranded beta-helix Phage fibre proteins Lactophage receptor-binding protein domain Receptor binding protein, rbp, middle domain (Lactococcus virus P2 ) [TaxId: 254252 ], SCOPe (2.08)
Ad1zrua3 All beta proteins Pseudo beta-prism I Bacteriophage trimeric proteins domain Lactophage receptor-binding protein N-terminal domain Receptor binding protein, rbp, N-terminal domain (Lactococcus virus P2 ) [TaxId: 254252 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2 FamilyLactophage receptor-binding protein head domain 8023809 4001644 SCOP2 (2022-06-29)
CSCOP2 FamilyLactophage receptor-binding protein domain 8023812 4002162 SCOP2 (2022-06-29)
CSCOP2 FamilyLactophage receptor-binding protein N-terminal domain 8023814 4002179 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyVirus attachment protein globular domain 8036189 3001376 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyPhage fibre proteins 8036192 3000351 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyBacteriophage trimeric proteins domain 8036194 3000915 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyVirus attachment protein globular domain 8036189 3001376 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyPhage fibre proteins 8036192 3000351 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyBacteriophage trimeric proteins domain 8036194 3000915 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyBacteriophage trimeric proteins domain 8036194 3000915 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyPhage fibre proteins 8036192 3000351 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyVirus attachment protein globular domain 8036189 3001376 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CCaudo_bapla_RBP_1st_1,Caudo_bapla_RBP_1ste1zruC2 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: Caudo_bapla_RBP_1st_1,Caudo_bapla_RBP_1stECOD (1.6)
CCaudo_bapla_RBP_3rde1zruC1 A: beta sandwichesX: Domain in virus attachment proteins (From Topology)H: Domain in virus attachment proteins (From Topology)T: Domain in virus attachment proteinsF: Caudo_bapla_RBP_3rdECOD (1.6)
CCaudo_bapla_RBP_1st_1e1zruC4 A: beta duplicates or obligate multimersX: Phage tail fiber protein trimerization domain (From Topology)H: Phage tail fiber protein trimerization domain (From Topology)T: Phage tail fiber protein trimerization domainF: Caudo_bapla_RBP_1st_1ECOD (1.6)
CCaudo_bapla_RBP_likee1zruC3 A: beta duplicates or obligate multimersX: Phage tail fiber protein trimerization domain (From Topology)H: Phage tail fiber protein trimerization domain (From Topology)T: Phage tail fiber protein trimerization domainF: Caudo_bapla_RBP_likeECOD (1.6)
BCaudo_bapla_RBP_1st_1,Caudo_bapla_RBP_1ste1zruB3 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: Caudo_bapla_RBP_1st_1,Caudo_bapla_RBP_1stECOD (1.6)
BCaudo_bapla_RBP_3rde1zruB2 A: beta sandwichesX: Domain in virus attachment proteins (From Topology)H: Domain in virus attachment proteins (From Topology)T: Domain in virus attachment proteinsF: Caudo_bapla_RBP_3rdECOD (1.6)
BCaudo_bapla_RBP_1st_1e1zruB1 A: beta duplicates or obligate multimersX: Phage tail fiber protein trimerization domain (From Topology)H: Phage tail fiber protein trimerization domain (From Topology)T: Phage tail fiber protein trimerization domainF: Caudo_bapla_RBP_1st_1ECOD (1.6)
BCaudo_bapla_RBP_likee1zruB4 A: beta duplicates or obligate multimersX: Phage tail fiber protein trimerization domain (From Topology)H: Phage tail fiber protein trimerization domain (From Topology)T: Phage tail fiber protein trimerization domainF: Caudo_bapla_RBP_likeECOD (1.6)
ACaudo_bapla_RBP_1st_1,Caudo_bapla_RBP_1ste1zruA2 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: Caudo_bapla_RBP_1st_1,Caudo_bapla_RBP_1stECOD (1.6)
ACaudo_bapla_RBP_3rde1zruA1 A: beta sandwichesX: Domain in virus attachment proteins (From Topology)H: Domain in virus attachment proteins (From Topology)T: Domain in virus attachment proteinsF: Caudo_bapla_RBP_3rdECOD (1.6)
ACaudo_bapla_RBP_likee1zruA3 A: beta duplicates or obligate multimersX: Phage tail fiber protein trimerization domain (From Topology)H: Phage tail fiber protein trimerization domain (From Topology)T: Phage tail fiber protein trimerization domainF: Caudo_bapla_RBP_likeECOD (1.6)

Domain Annotation: CATH CATH Database Homepage