Crystal structure of EBA-175 Region II (RII) crystallized in the presence of (alpha)2,3-sialyllactose
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d1zrob1 | All alpha proteins | Duffy binding domain-like | Duffy binding domain-like | Duffy binding domain | Erythrocyte binding antigen region II | malaria parasite P. falciparum (Plasmodium falciparum ) [TaxId: 5833 ], | SCOPe (2.08) |
| A | d1zroa1 | All alpha proteins | Duffy binding domain-like | Duffy binding domain-like | Duffy binding domain | Erythrocyte binding antigen region II | malaria parasite P. falciparum (Plasmodium falciparum ) [TaxId: 5833 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Duffy binding domain-like | 8036171 | 3001914 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Duffy binding domain-like | 8036170 | 3001914 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | Duffy binding domain | 8023790 | 4001588 | SCOP2 (2022-06-29) |
| A | SCOP2 Family | Duffy binding domain | 8023791 | 4001588 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Duffy binding domain-like | 8036170 | 3001914 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Duffy binding domain-like | 8036171 | 3001914 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | e1zroB3 | A: C-terminal subdomain in Lon-related proteases catalytic domains | X: p53 tetramerization domain | H: p53 tetramerization domain | T: Cation_efflux | F: | ECOD (20:10:01) | |
| B | e1zroB1 | A: Immunoglobulin-like beta-sandwich | X: Immunoglobulin-related | H: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | T: V-set | F: | ECOD (20:10:01) | |
| A | e1zroA1 | A: Duffy-binding-like domain, N-terminal subdomain | X: Duffy-binding-like domain, N-terminal subdomain | H: Duffy-binding-like domain, N-terminal subdomain | T: Duffy_binding | F: | ECOD (20:10:01) | |
| A | e1zroA3 | A: Duffy-binding-like domain, C-terminal subdomain | X: Duffy-binding-like domain, C-terminal subdomain | H: Duffy-binding-like domain, C-terminal subdomain | T: PFEMP | F: | ECOD (20:10:01) | |
| A | e1zroA4 | A: Duffy-binding-like domain, C-terminal subdomain | X: Duffy-binding-like domain, C-terminal subdomain | H: Duffy-binding-like domain, C-terminal subdomain | T: DBL_C | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 1.10.287.1660 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) | |
| A | 1.10.287.1660 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| erythrocyte binding antigen region II | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR008602 | Duffy-antigen binding domain | Domain | |
| IPR042202 | Duffy-antigen binding superfamily | Homologous Superfamily |
