1ZB8 | pdb_00001zb8

Crystal structure of Xylella fastidiosa organic peroxide resistance protein

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d1zb8b_	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	Ohr/OsmC resistance proteins	Organic hydroperoxide resistance protein Ohr	(Xylella fastidiosa 9a5c ) [TaxId: 160492 ],	SCOPe (2.08)
A	d1zb8a_	Alpha and beta proteins (a+b)	OsmC-like	OsmC-like	Ohr/OsmC resistance proteins	Organic hydroperoxide resistance protein Ohr	(Xylella fastidiosa 9a5c ) [TaxId: 160492 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	OsmC-like	8088761	3000621	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	OsmC-like	8088761	3000621	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B		e1zb8B1	A: HTH	X: HTH	H: winged helix domain	T: CopC	F:	ECOD (20:10:01)
A		e1zb8A1	A: HTH	X: HTH	H: winged helix domain	T: CopC	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
B	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)
A	2.20.25.10	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
A	3.30.300.20	Alpha Beta	2-Layer Sandwich	GMP Synthetase	Chain A, domain 3	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	organic hydroperoxide resistance protein	-	response to oxidative stress response to stimulus response to stress	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR015946	K homology domain-like, alpha/beta	Homologous Superfamily
A, B	IPR036102	OsmC/Ohr superfamily	Homologous Superfamily
A, B	IPR019953	Organic hydroperoxide resistance protein famiy	Family
A, B	IPR003718	OsmC/Ohr conserved domain	Domain

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B	OCS	Parent Component: CYS RESID: AA0556 PSI-MOD : L-cysteic acid (L-cysteine sulfonic acid) MOD:00460

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.