Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1z21a1 All alpha proteins Type III secretion system domain Type III secretion system domain YopR Core Yop proteins translocation protein H, YscH (IcrP) (Yersinia pestis ) [TaxId: 632 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyYopR core-like8022715 4001352 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyType III secretion system domain8035095 3001358 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF09025e1z21A1 A: alpha arraysX: Type III secretion system domain-likeH: Type III secretion system domains (From Topology)T: Type III secretion system domainsF: PF09025ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.10.1000 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Type III secretion system virulence factor YopR, core domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF09025YopR, type III needle-polymerisation regulator (T3SS_needle_reg)YopR, type III needle-polymerisation regulatorThe YopR core domain, predominantly found in the Gammaproteobacteria virulence factor YopR, is composed of five alpha-helices, four of which are arranged in an antiparallel bundle. Little is known about this domain, though it may contribute to the vi ...The YopR core domain, predominantly found in the Gammaproteobacteria virulence factor YopR, is composed of five alpha-helices, four of which are arranged in an antiparallel bundle. Little is known about this domain, though it may contribute to the virulence of the protein YopR [1]. YopR controls the selective access of early (YscF, YscI and YscP) substrates to the type III secretion machines of yersiniae and other Gammaproteobacteriae. YopR is a mobile regulatory component thought to function as a checkpoints probing the completion of discrete intermediary stages in the assembly of the type III injection pathway. The location of secreted YopR (into the medium) is directly controlling the secretion of YscF, the polymerised needle protein Pfam:PF09392, thereby impacting the assembly of type III machines [2].
Domain