Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyMtd variable domain-like8022507 4000453 SCOP2 (2022-06-29)
ASCOP2 FamilyMtd domain-like8022505 4002176 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyC-type lectin-like8034887 3001261 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyBacteriophage trimeric proteins domain8034885 3000915 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF21916e1yu0A4 A: beta sandwichesX: Lactophage receptor-binding protein N-terminal domain-like (From Topology)H: Lactophage receptor-binding protein N-terminal domain-like (From Topology)T: Lactophage receptor-binding protein N-terminal domain-likeF: PF21916ECOD (1.6)
APF18454e1yu0A5 A: beta duplicates or obligate multimersX: Major tropism determinant (Mtd) trimerization domain-related (From Topology)H: Major tropism determinant (Mtd) trimerization domain-related (From Topology)T: Major tropism determinant (Mtd) trimerization domain-relatedF: PF18454ECOD (1.6)
AF_UNCLASSIFIEDe1yu0A3 A: a+b complex topologyX: C-type lectin-like (From Homology)H: C-type lectin-likeT: Sulfatase-modifying factor-likeF: F_UNCLASSIFIEDECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF18454Major tropism determinant N-terminal domain (Mtd_N)Major tropism determinant N-terminal domainThis is the N-terminal domain of major tropism determinant (Mtd), a retroelement-encoded receptor-binding protein. Mtd-N forms a three-fold symmetric beta-prism. This resembles the pseudo three-fold-symmetric beta-prisms of monocot lectins, but lacks ...This is the N-terminal domain of major tropism determinant (Mtd), a retroelement-encoded receptor-binding protein. Mtd-N forms a three-fold symmetric beta-prism. This resembles the pseudo three-fold-symmetric beta-prisms of monocot lectins, but lacks residues in these lectins identified as binding carbohydrates. The beta-prism and beta-sandwich domains reinforce overall trimeric assembly and therefore may have indirect roles in stabilizing the backbone of the variable region [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage