YEAST TFIIA/TBP/DNA COMPLEX
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C [auth A] | SCOP2B Superfamily | TATA-box binding protein-like | 8036833 | 3000705 | SCOP2B (2022-06-29) |
| C [auth A] | SCOP2B Superfamily | TATA-box binding protein-like | 8036831 | 3000705 | SCOP2B (2022-06-29) |
| D [auth B] | SCOP2B Superfamily | Transcription factor IIA (TFIIA), alpha-helical domain | 8036834 | 3001887 | SCOP2B (2022-06-29) |
| E [auth C] | SCOP2B Superfamily | Transcription factor IIA (TFIIA), beta-barrel domain | 8036836 | 3001281 | SCOP2B (2022-06-29) |
| F [auth D] | SCOP2B Superfamily | Transcription factor IIA (TFIIA), alpha-helical domain | 8036837 | 3001887 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth A] | Polyketide_cyc2 | e1ytfA1 | A: a/b three-layered sandwiches | X: ETN0001 domain-like | H: ETN0001 domain-like | T: Mss4-like | F: Polyketide_cyc2 | ECOD (v294.1) |
| D [auth B] | CoV_NSP4_C | e1ytfB2 | A: a/b three-layered sandwiches | X: DEATH domain | H: Ten stranded beta/alpha barrel | T: Ten stranded beta/alpha barrel | F: CoV_NSP4_C | ECOD (v294.1) |
| E [auth C] | Cloacin | e1ytfC1 | A: a/b three-layered sandwiches | X: Cloacin translocation domain | H: Cloacin translocation domain | T: Cloacin translocation domain | F: Cloacin | ECOD (v294.1) |
| F [auth D] | GMC_oxred_N,GMC_oxred_C | e1ytfD1 | A: a/b three-layered sandwiches | X: amino-terminal domain of OmpATb | H: amino-terminal domain of OmpATb | T: amino-terminal domain of OmpATb | F: GMC_oxred_N,GMC_oxred_C | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C [auth A] | 3.30.310.10 | Alpha Beta | 2-Layer Sandwich | TATA-Binding Protein | TATA-Binding Protein | CATH (4.3.0) |
| D [auth B] | 1.10.287.100 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (4.3.0) | |
| E [auth C] | 2.30.18.10 | Mainly Beta | Roll | TATA box binding Protein, subunit D | domain 2 | CATH (4.3.0) |
| F [auth D] | 1.10.287.190 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | Transcription factor IIA gamma subunit, alpha-helical domain | CATH (4.3.0) |
| F [auth D] | 2.30.18.10 | Mainly Beta | Roll | TATA box binding Protein, subunit D | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| C [auth A] | PF00352 | Transcription factor TFIID (or TATA-binding protein, TBP) (TBP) | Transcription factor TFIID (or TATA-binding protein, TBP) | Domain | |
| F [auth D] | PF02751 | Transcription initiation factor IIA, gamma subunit (TFIIA_gamma_C) | Transcription initiation factor IIA, gamma subunit | Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor IIA (TFIIA) is a multimeric protein which facilitates the binding of TFIID to the TATA b ... | Domain |
| F [auth D] | PF02268 | Transcription initiation factor IIA, gamma subunit, helical domain (TFIIA_gamma_N) | Transcription initiation factor IIA, gamma subunit, helical domain | Accurate transcription in vivo requires at least six general transcription initiation factors, in addition to RNA polymerase II. Transcription initiation factor IIA (TFIIA) is a multimeric protein which facilitates the binding of TFIID to the TATA ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| C [auth A] | IPR030491 | TATA-box binding protein, conserved site | Conserved Site |
| C [auth A] | IPR000814 | TATA-box binding protein | Family |
| C [auth A] | IPR012295 | TBP domain superfamily | Homologous Superfamily |
| C [auth A] | IPR033710 | TATA-box binding protein, eukaryotic | Family |
| D [auth B] | IPR004855 | Transcription factor IIA, alpha/beta subunit | Family |
| D [auth B] | IPR009088 | Transcription factor IIA, beta-barrel | Homologous Superfamily |
| E [auth C] | IPR004855 | Transcription factor IIA, alpha/beta subunit | Family |
| E [auth C] | IPR009088 | Transcription factor IIA, beta-barrel | Homologous Superfamily |
| F [auth D] | IPR015871 | Transcription initiation factor IIA, gamma subunit, C-terminal | Domain |
| F [auth D] | IPR015872 | Transcription initiation factor IIA, gamma subunit, N-terminal | Domain |
| F [auth D] | IPR009083 | Transcription factor IIA, alpha-helical domain | Homologous Superfamily |
| F [auth D] | IPR009088 | Transcription factor IIA, beta-barrel | Homologous Superfamily |
| F [auth D] | IPR003194 | Transcription initiation factor IIA, gamma subunit | Family |














