1YDM | pdb_00001ydm

X-Ray structure of Northeast Structural Genomics target SR44


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyNagB/RpiA/CoA transferase-like 8066653 3000693 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNagB/RpiA/CoA transferase-like 8066653 3000693 SCOP2B (2022-06-29)
ASCOP2 FamilyMethenyltetrahydrofolate synthetase-like 8066652 4002105 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyNagB/RpiA/CoA transferase-like 8066653 3000693 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ce1ydmC1 A: HTHX: HTHH: winged helix domainT: tRNA-synt_1bF:ECOD (20:10:01)
Be1ydmB1 A: HTHX: HTHH: winged helix domainT: tRNA-synt_1bF:ECOD (20:10:01)
Ae1ydmA1 A: Globin-likeX: Globin-likeH: Globin-likeT: YbeYF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C3.40.50.10420 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NagB/RpiA/CoA transferase-likeCATH (4.3.0)
B3.40.50.10420 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NagB/RpiA/CoA transferase-likeCATH (4.3.0)
A3.40.50.10420 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NagB/RpiA/CoA transferase-likeCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage