Annotations: 1YBX

Conserved hypothetical protein Cth-383 from Clostridium thermocellum

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d1ybxb_	Alpha and beta proteins (a+b)	YbaB-like	YbaB-like	automated matches	automated matches	(Acetivibrio thermocellus ) [TaxId: 1515 ],	SCOPe (2.08)
A	d1ybxa_	Alpha and beta proteins (a+b)	YbaB-like	YbaB-like	automated matches	automated matches	(Acetivibrio thermocellus ) [TaxId: 1515 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	YbaB-like	8075144	3000386	SCOP2B (2022-06-29)
A	SCOP2 Family	YbaB-like	8075143	4003186	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YbaB-like	8075144	3000386	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	7kD_DNA_binding	e1ybxB1	A: a/b three-layered sandwiches	X: HTH	H: Nudix	T: winged helix domain	F: 7kD_DNA_binding	ECOD (v294.1)
A	Toxin_cobra-type	e1ybxA1	A: a/b three-layered sandwiches	X: Globin-like	H: Ring-building motif I in type III secretion system	T: Ring-building motif I in type III secretion system	F: Toxin_cobra-type	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.30.1310.10	Alpha Beta	2-Layer Sandwich	Ybab	Chain: A	CATH (4.3.0)
A	3.30.1310.10	Alpha Beta	2-Layer Sandwich	Ybab	Chain: A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF02575	YbaB/EbfC DNA-binding family (YbaB_DNA_bd)	YbaB/EbfC DNA-binding family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Conserved hypothetical protein	DNA binding binding nucleic acid binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol intracellular organelle bacterial nucleoid organelle membraneless organelle intracellular membraneless organelle nucleoid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR004401	Nucleoid-associated protein YbaB/EbfC	Family
A, B	IPR036894	Nucleoid-associated protein YbaB-like domain superfamily	Homologous Superfamily

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