1Y82 | pdb_00001y82

Conserved hypothetical protein Pfu-367848-001 from Pyrococcus furiosus

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d1y82d_	Alpha and beta proteins (a/b)	PIN domain-like	PIN domain-like	PIN domain	Hypothetical protein PF0355	(Pyrococcus furiosus ) [TaxId: 2261 ],	SCOPe (2.08)
C	d1y82c_	Alpha and beta proteins (a/b)	PIN domain-like	PIN domain-like	PIN domain	Hypothetical protein PF0355	(Pyrococcus furiosus ) [TaxId: 2261 ],	SCOPe (2.08)
B	d1y82b_	Alpha and beta proteins (a/b)	PIN domain-like	PIN domain-like	PIN domain	Hypothetical protein PF0355	(Pyrococcus furiosus ) [TaxId: 2261 ],	SCOPe (2.08)
A	d1y82a1	Alpha and beta proteins (a/b)	PIN domain-like	PIN domain-like	PIN domain	Hypothetical protein PF0355	(Pyrococcus furiosus ) [TaxId: 2261 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	PIN domain-like	8034192	3001041	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	PIN domain-like	8034192	3001041	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	PIN domain-like	8034192	3001041	SCOP2B (2022-06-29)
A	SCOP2 Family	PIN domain	8021812	4000475	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	PIN domain-like	8034192	3001041	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	PIN	e1y82D1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: PIN domain-like	F: PIN	ECOD (1.6)
C	PIN	e1y82C1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: PIN domain-like	F: PIN	ECOD (1.6)
B	PIN	e1y82B1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: PIN domain-like	F: PIN	ECOD (1.6)
A	PIN	e1y82A1	A: a/b three-layered sandwiches	X: HAD domain-like	H: HAD domain-related	T: PIN domain-like	F: PIN	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.40.50.1010	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	5'-nuclease	CATH (4.3.0)
C	3.40.50.1010	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	5'-nuclease	CATH (4.3.0)
B	3.40.50.1010	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	5'-nuclease	CATH (4.3.0)
A	3.40.50.1010	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	5'-nuclease	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF01850	PIN domain (PIN)	PIN domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	hypothetical protein	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding nuclease activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR002716	PIN domain	Domain
A, B, C, D	IPR016647	Probable ribonuclease VapC, Thermococci	Family
A, B, C, D	IPR029060	PIN-like domain superfamily	Homologous Superfamily
A, B, C, D	IPR051749	PINc/VapC_TA_RNase	Unknown
A, B, C, D	IPR022907	VapC family	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.