1XU6 | pdb_00001xu6

Structure of the C-terminal domain from Trypanosoma brucei Variant Surface Glycoprotein MITat1.2

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1xu6a1	Small proteins	Trefoil/Plexin domain-like	Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain	Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain	Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain	(Trypanosoma brucei brucei ) [TaxId: 5702 ],	SCOPe (2.08)
A	d1xu6a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Trypanosoma brucei brucei ) [TaxId: 5702 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain	8031789	4003919	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain	8044167	3001816	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e1xu6A1	A: Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain	X: Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain	H: Variant surface glycoprotein MITAT 1.2, VSG 221, C-terminal domain	T: PF29633	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	4.10.110.20	Few Secondary Structures	Irregular	Spasmolytic Protein	domain 1	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Variant surface glycoprotein MITAT 1.2	-	symbiont-mediated perturbation of host defense response biological process involved in interspecies interaction between organisms response to stimulus response to other organism symbiont-mediated perturbation of host immune response symbiont-mediated response to host defenses response to external stimulus biological process involved in interaction with host response to biotic stimulus biological process involved in symbiotic interaction symbiont-mediated perturbation of host process response to host immune response symbiont-mediated evasion of host immune response response to host symbiont-mediated perturbation of host defense response biological process involved in interspecies interaction between organisms response to stimulus response to other organism symbiont-mediated perturbation of host immune response symbiont-mediated response to host defenses response to external stimulus biological process involved in interaction with host response to biotic stimulus biological process involved in symbiotic interaction symbiont-mediated perturbation of host process response to host immune response symbiont-mediated evasion of host immune response response to host response to external biotic stimulus modulation of process of another organism	cellular anatomical structure membrane side of membrane cell periphery plasma membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001812	Variant surface glycoprotein, N-terminal domain	Domain
A	IPR027446	Variant surface glycoprotein C-terminal domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.