1X3L | pdb_00001x3l

Crystal structure of the PH0495 protein from pyrococccus horikoshii OT3

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1x3la_	Alpha and beta proteins (a/b)	GckA/TtuD-like	GckA/TtuD-like	automated matches	automated matches	(Pyrococcus horikoshii OT3 ) [TaxId: 70601 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	GckA/TtuD-like	8089547	4003145	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	GckA/TtuD-like	8089548	3000327	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	MOFRL	e1x3lA2	A: a+b two layers	X: Tetrapyrrole methylase C-terminal domain-like	H: GckA/TtuD-like domain 2 (From Topology)	T: GckA/TtuD-like domain 2	F: MOFRL	ECOD (1.6)
A	DUF4147	e1x3lA1	A: a/b three-layered sandwiches	X: GckA/TtuD-like domain 1 (From Topology)	H: GckA/TtuD-like domain 1 (From Topology)	T: GckA/TtuD-like domain 1	F: DUF4147	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.40.1480.10	Alpha Beta	3-Layer(aba) Sandwich	glycerate kinase, domain 1	MOFRL domain	CATH (4.3.0)
A	3.40.50.10180	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Glycerate kinase, MOFRL-like N-terminal domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF05161	MOFRL family (MOFRL)	MOFRL family	-	Family
A	PF13660	Domain of unknown function (DUF4147) (DUF4147)	Domain of unknown function (DUF4147)	This domain is frequently found at the N-terminus of proteins carrying the glycerate kinase-like domain MOFRL, Pfam:PF05161.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	hypothetical protein PH0495	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding kinase activity transferase activity catalytic activity glycerate kinase activity phosphotransferase activity, alcohol group as acceptor transferase activity, transferring phosphorus-containing groups glycerate 2-kinase activity	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR038614	Glycerate kinase, N-terminal domain superfamily	Homologous Superfamily
A	IPR037035	Glycerate kinase-like, C-terminal domain superfamily	Homologous Superfamily
A	IPR007835	MOFRL domain	Domain
A	IPR025286	MOFRL-associated domain	Domain
A	IPR039760	MOFRL domain-containing protein	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.