1X2M

Solution structure of the homeobox domain of mouse LAG1 longevity assurance homolog 6

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1x2ma1	All alpha proteins	DNA/RNA-binding 3-helical bundle	Homeodomain-like	Homeodomain	Lag1 longevity assurance homolog 6, LASS6	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
A	d1x2ma3	Artifacts	Tags	Tags	Tags	C-terminal Tags	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
A	d1x2ma2	Artifacts	Tags	Tags	Tags	N-terminal Tags	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Homeodomain	8002350	4000291	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Homeodomain-like	8056696	3000001	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Homeobox	e1x2mA1	A: alpha arrays	X: HTH	H: HTH	T: tri-helical	F: Homeobox	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.10.60	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Homeodomain-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00046	Homeodomain (Homeodomain)	Homeodomain	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	LAG1 longevity assurance homolog 6	DNA binding binding organic cyclic compound binding nucleic acid binding acyltransferase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity sphingosine N-acyltransferase activity catalytic activity N-acyltransferase activity	response to stimulus defense response response to stress inflammatory response regulation of glial cell apoptotic process regulation of biological process oligodendrocyte apoptotic process regulation of cellular process positive regulation of programmed cell death positive regulation of glial cell apoptotic process regulation of apoptotic process positive regulation of oligodendrocyte apoptotic process biological regulation positive regulation of biological process response to stimulus defense response response to stress inflammatory response regulation of glial cell apoptotic process regulation of biological process oligodendrocyte apoptotic process regulation of cellular process positive regulation of programmed cell death positive regulation of glial cell apoptotic process regulation of apoptotic process positive regulation of oligodendrocyte apoptotic process biological regulation positive regulation of biological process regulation of programmed cell death cell death positive regulation of apoptotic process glial cell apoptotic process regulation of oligodendrocyte apoptotic process cellular process apoptotic process programmed cell death positive regulation of cellular process membrane lipid metabolic process organonitrogen compound metabolic process sphingolipid biosynthetic process cellular biosynthetic process cellular metabolic process organonitrogen compound biosynthetic process lipid biosynthetic process primary metabolic process sphingolipid metabolic process organic substance metabolic process biosynthetic process organic substance biosynthetic process cellular lipid metabolic process metabolic process membrane lipid biosynthetic process lipid metabolic process ceramide metabolic process amide biosynthetic process ceramide biosynthetic process amide metabolic process	membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle endoplasmic reticulum cytoplasm cellular anatomical entity intracellular membrane-bounded organelle endomembrane system organelle subcompartment membrane endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network organelle membrane membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle endoplasmic reticulum cytoplasm cellular anatomical entity intracellular membrane-bounded organelle endomembrane system organelle subcompartment membrane endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network organelle membrane endoplasmic reticulum membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR001356	Homeobox domain	Domain
A	IPR009057	Homeobox-like domain superfamily	Homologous Superfamily
A	IPR016439	Sphingosine N-acyltransferase Lag1/Lac1-like	Family
A	IPR006634	TRAM/LAG1/CLN8 homology domain	Domain

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.