Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth L]SCOP2B SuperfamilyEGF/Laminin-like8039292 3000412 SCOP2B (2021-05-27)
A [auth L]SCOP2B SuperfamilyEGF/Laminin-like8039297 3000412 SCOP2B (2021-05-27)
A [auth L]SCOP2B SuperfamilyGLA-domain8039300 3001028 SCOP2B (2021-05-27)
B [auth H]SCOP2B SuperfamilyTrypsin-like serine proteases8003776 3000114 SCOP2B (2021-05-27)
C [auth T]SCOP2B SuperfamilyFibronectin type III8055099 3002063 SCOP2B (2021-05-27)
C [auth T]SCOP2B SuperfamilyFibronectin type III8055493 3002063 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth L]PF00008e1wunL1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: PF00008ECOD (1.6)
A [auth L]PF14670e1wunL2 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: PF14670ECOD (1.6)
A [auth L]PF00594e1wunL3 A: few secondary structure elementsX: GLA-domain (From Topology)H: GLA-domain (From Topology)T: GLA-domainF: PF00594ECOD (1.6)
B [auth H]PF00089e1wunH1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: FMN-binding split barrel 2F: PF00089ECOD (1.6)
C [auth T]PF01108e1wunT2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF01108ECOD (1.6)
C [auth T]PF09294e1wunT1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF09294ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B [auth H]2.40.10.10 Mainly Beta Beta Barrel Thrombin, subunit H Trypsin-like serine proteasesCATH (4.3.0)
C [auth T]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth L]PF00008EGF-like domain (EGF)EGF-like domainThere is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is t ...There is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is the main reason of discrepancy between swiss-prot domain start/end and Pfam). The family is hard to model due to many similar but different sub-types of EGF domains. Pfam certainly misses a number of EGF domains.
Domain
A [auth L]PF14670Coagulation Factor Xa inhibitory site (FXa_inhibition)Coagulation Factor Xa inhibitory siteThis short domain on coagulation enzyme factor Xa is found to be the target for a potent inhibitor of coagulation, TAK-442 [1].Domain
A [auth L]PF00594Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain (Gla)Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domainThis domain is responsible for the high-affinity binding of calcium ions. This domain contains post-translational modifications of many glutamate residues by Vitamin K-dependent carboxylation to form gamma-carboxyglutamate (Gla).Domain
B [auth H]PF00089Trypsin (Trypsin)Trypsin- Domain
C [auth T]PF09294Interferon-alpha/beta receptor, fibronectin type III (Interfer-bind)Interferon-alpha/beta receptor, fibronectin type IIIMembers of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha [1].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth L]Coagulation factor VII
B [auth H]Coagulation factor VII
C [auth T]Tissue factor

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth L]IPR018097EGF-like calcium-binding, conserved siteConserved Site
A [auth L]IPR018114Serine proteases, trypsin family, histidine active siteActive Site
A [auth L]IPR009003Peptidase S1, PA clanHomologous Superfamily
A [auth L]IPR033116Serine proteases, trypsin family, serine active siteActive Site
A [auth L]IPR001254Serine proteases, trypsin domainDomain
A [auth L]IPR035972Gamma-carboxyglutamic acid-rich (GLA) domain superfamilyHomologous Superfamily
A [auth L]IPR001881EGF-like calcium-binding domainDomain
A [auth L]IPR012224Peptidase S1A, coagulation factor VII/IX/X/C/ZFamily
A [auth L]IPR000294Gamma-carboxyglutamic acid-rich (GLA) domainDomain
A [auth L]IPR000742EGF-like domainDomain
A [auth L]IPR017857Coagulation factor-like, Gla domain superfamilyHomologous Superfamily
A [auth L]IPR001314Peptidase S1A, chymotrypsin familyFamily
A [auth L]IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
A [auth L]IPR000152EGF-type aspartate/asparagine hydroxylation sitePTM
B [auth H]IPR018097EGF-like calcium-binding, conserved siteConserved Site
B [auth H]IPR018114Serine proteases, trypsin family, histidine active siteActive Site
B [auth H]IPR009003Peptidase S1, PA clanHomologous Superfamily
B [auth H]IPR033116Serine proteases, trypsin family, serine active siteActive Site
B [auth H]IPR001254Serine proteases, trypsin domainDomain
B [auth H]IPR035972Gamma-carboxyglutamic acid-rich (GLA) domain superfamilyHomologous Superfamily
B [auth H]IPR001881EGF-like calcium-binding domainDomain
B [auth H]IPR012224Peptidase S1A, coagulation factor VII/IX/X/C/ZFamily
B [auth H]IPR000294Gamma-carboxyglutamic acid-rich (GLA) domainDomain
B [auth H]IPR000742EGF-like domainDomain
B [auth H]IPR017857Coagulation factor-like, Gla domain superfamilyHomologous Superfamily
B [auth H]IPR001314Peptidase S1A, chymotrypsin familyFamily
B [auth H]IPR043504Peptidase S1, PA clan, chymotrypsin-like foldHomologous Superfamily
B [auth H]IPR000152EGF-type aspartate/asparagine hydroxylation sitePTM
C [auth T]IPR001187Tissue factorFamily
C [auth T]IPR003961Fibronectin type IIIDomain
C [auth T]IPR015373Interferon/interleukin receptor domainDomain
C [auth T]IPR013783Immunoglobulin-like foldHomologous Superfamily
C [auth T]IPR036116Fibronectin type III superfamilyHomologous Superfamily
C [auth T]IPR030472Tissue factor, conserved siteConserved Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth L]PharosP08709
B [auth H]PharosP08709
C [auth T]PharosP13726

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A [auth L]CGU Parent Component: GLU

RESIDAA0032

PSI-MOD :  L-gamma-carboxyglutamic acid MOD:00041