Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad1wj5a1 All alpha proteins DNA/RNA-binding 3-helical bundle 'Winged helix' DNA-binding domain An Obfc1 domain OB fold-containing protein 1, Obfc1 house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad1wj5a3 Artifacts Tags Tags Tags C-terminal Tags house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad1wj5a2 Artifacts Tags Tags Tags N-terminal Tags house mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilySTN1 domain-like8003263 4000256 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyWinged helix DNA-binding domain8003264 3000034 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF09170e1wj5A1 A: alpha arraysX: HTHH: HTHT: wingedF: PF09170ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.10.980 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A CST, Suppressor of Cdc13 homolog, complex subunit STN1, N-terminal domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF09170CST, complex subunit STN1, C terminal (STN1_2)CST, complex subunit STN1, C terminalSTN1 is a component of the CST complex, a complex that binds to single-stranded DNA and is required for protecting telomeres from DNA degradation. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while is ...STN1 is a component of the CST complex, a complex that binds to single-stranded DNA and is required for protecting telomeres from DNA degradation. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity on their own. In addition to telomere protection, the CST complex probably has a more general role in DNA metabolism at non-telomeric sites. This entry represents the C-terminal region of Stn1 which has two winged helix-turn-helix (wHTH) motifs, wHTH1 and wHTH2 [2,4]. wHTH1 is structurally similar to that in RPA32 with a large insertion between helices alpha2 and alpha3, unique to Stn1, that may allow interaction with a different set of proteins that function at telomeres such as Ctc1 [4]. wHTH2 is most similar to the DNA-binding wHTH motifs of the pur operon repressor and RepE replication initiator, but it does not bind double-stranded DNA [5].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
hypothetical protein (RIKEN cDNA 0610009H20)