1WGG | pdb_00001wgg

Solution Structure of the N-terminal Ubiquitin-like Domain of Mouse Ubiquitin Specific Protease 14 (USP14)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d1wgga1	Alpha and beta proteins (a+b)	beta-Grasp (ubiquitin-like)	Ubiquitin-like	Ubiquitin-related	Ubiquitin carboxyl-terminal hydrolase 14	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
A	d1wgga3	Artifacts	Tags	Tags	Tags	C-terminal Tags	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)
A	d1wgga2	Artifacts	Tags	Tags	Tags	N-terminal Tags	house mouse (Mus musculus ) [TaxId: 10090 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Ubiquitin-related	8031139	4000962	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Ubiquitin-like	8043517	3000157	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	ubiquitin_2	e1wggA1	A: a+b two layers	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: ubiquitin_2	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	3.10.20.90	Alpha Beta	Roll	Ubiquitin-like (UB roll)	Phosphatidylinositol 3-kinase Catalytic Subunit	CATH (4.2.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Ubiquitin carboxyl-terminal hydrolase 14	enzyme regulator activity molecular function inhibitor activity peptidase regulator activity molecular function regulator activity enzyme inhibitor activity peptidase inhibitor activity endopeptidase regulator activity endopeptidase inhibitor activity cysteine-type peptidase activity ubiquitin-like protein peptidase activity peptidase activity cysteine-type deubiquitinase activity catalytic activity, acting on a protein hydrolase activity enzyme regulator activity molecular function inhibitor activity peptidase regulator activity molecular function regulator activity enzyme inhibitor activity peptidase inhibitor activity endopeptidase regulator activity endopeptidase inhibitor activity cysteine-type peptidase activity ubiquitin-like protein peptidase activity peptidase activity cysteine-type deubiquitinase activity catalytic activity, acting on a protein hydrolase activity catalytic activity deubiquitinase activity protein-containing complex binding binding proteasome binding	cellular response to stimulus regulation of cellular process negative regulation of proteolysis response to stimulus regulation of cellular response to stress negative regulation of biological process regulation of primary metabolic process ERAD pathway regulation of proteolysis proteolysis negative regulation of protein metabolic process response to endoplasmic reticulum stress regulation of ERAD pathway regulation of biological process cellular response to stimulus regulation of cellular process negative regulation of proteolysis response to stimulus regulation of cellular response to stress negative regulation of biological process regulation of primary metabolic process ERAD pathway regulation of proteolysis proteolysis negative regulation of protein metabolic process response to endoplasmic reticulum stress regulation of ERAD pathway regulation of biological process regulation of protein metabolic process negative regulation of metabolic process primary metabolic process response to nitrogen compound regulation of response to stimulus negative regulation of proteasomal protein catabolic process response to chemical regulation of proteasomal protein catabolic process metabolic process macromolecule metabolic process regulation of metabolic process catabolic process negative regulation of proteolysis involved in protein catabolic process proteolysis involved in protein catabolic process negative regulation of ERAD pathway regulation of response to endoplasmic reticulum stress macromolecule catabolic process negative regulation of protein catabolic process cellular response to stress regulation of proteolysis involved in protein catabolic process regulation of response to stress response to stress negative regulation of cellular process protein metabolic process negative regulation of macromolecule metabolic process negative regulation of response to endoplasmic reticulum stress negative regulation of catabolic process negative regulation of response to stimulus biological regulation proteasomal protein catabolic process regulation of macromolecule metabolic process protein catabolic process regulation of catabolic process cellular process regulation of protein catabolic process chemotaxis regulation of response to external stimulus response to external stimulus regulation of chemotaxis taxis regulation of locomotion locomotion regulation of ubiquitin-dependent protein catabolic process modification-dependent macromolecule catabolic process negative regulation of ubiquitin-dependent protein catabolic process modification-dependent protein catabolic process ubiquitin-dependent protein catabolic process biological process involved in interspecies interaction between organisms immune response response to other organism defense response defense response to symbiont response to biotic stimulus immune system process defense response to other organism innate immune response response to external biotic stimulus proteasome-mediated ubiquitin-dependent protein catabolic process protein deubiquitination protein modification by small protein removal macromolecule modification post-translational protein modification protein modification process protein K48-linked deubiquitination protein modification by small protein conjugation or removal trans-synaptic signaling synaptic signaling signaling anterograde trans-synaptic signaling cell-cell signaling chemical synaptic transmission cell communication	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membraneless organelle intracellular membrane-bounded organelle nucleolus intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle membraneless organelle nuclear lumen cell surface cytosolic region presynapse presynaptic cytosol synapse cell junction cytoplasm cytosol cell periphery plasma membrane membrane glutamatergic synapse cytoplasmic vesicle intracellular vesicle vesicle protein-containing complex catalytic complex peptidase complex proteasome complex endopeptidase complex intracellular protein-containing complex endoplasmic reticulum endomembrane system

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR019954	Ubiquitin conserved site	Conserved Site
A	IPR044635	Ubiquitin carboxyl-terminal hydrolase 14-like	Family
A	IPR018200	Ubiquitin specific protease, conserved site	Conserved Site
A	IPR038765	Papain-like cysteine peptidase superfamily	Homologous Superfamily
A	IPR000626	Ubiquitin-like domain	Domain
A	IPR028889	Ubiquitin specific protease UPS, catalytic domain	Domain
A	IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Domain
A	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.