1VR4 | pdb_00001vr4

Crystal Structure of MCSG TArget APC22750 from Bacillus cereus

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
E	d1vr4e_	Alpha and beta proteins (a+b)	Dodecin subunit-like	YbjQ-like	automated matches	automated matches	(Bacillus cereus ATCC 14579 ) [TaxId: 226900 ],	SCOPe (2.08)
D	d1vr4d_	Alpha and beta proteins (a+b)	Dodecin subunit-like	YbjQ-like	automated matches	automated matches	(Bacillus cereus ATCC 14579 ) [TaxId: 226900 ],	SCOPe (2.08)
C	d1vr4c_	Alpha and beta proteins (a+b)	Dodecin subunit-like	YbjQ-like	automated matches	automated matches	(Bacillus cereus ATCC 14579 ) [TaxId: 226900 ],	SCOPe (2.08)
B	d1vr4b_	Alpha and beta proteins (a+b)	Dodecin subunit-like	YbjQ-like	automated matches	automated matches	(Bacillus cereus ATCC 14579 ) [TaxId: 226900 ],	SCOPe (2.08)
A	d1vr4a1	Alpha and beta proteins (a+b)	Dodecin subunit-like	YbjQ-like	YbjQ-like	Hypothetical protein BC1012	(Bacillus cereus ATCC 14579 ) [TaxId: 226900 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
E	SCOP2B Superfamily	YbjQ-like	8032688	3001160	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	YbjQ-like	8032688	3001160	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	YbjQ-like	8032688	3001160	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	YbjQ-like	8032688	3001160	SCOP2B (2022-06-29)
A	SCOP2 Family	YbjQ-like	8020308	4003633	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	YbjQ-like	8032688	3001160	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E	HSP90	e1vr4E1	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: HSP90	ECOD (develop294)
D	HSP90	e1vr4D1	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: HSP90	ECOD (develop294)
C	HSP90	e1vr4C1	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: HSP90	ECOD (develop294)
B	PGM_PMM_I	e1vr4B2	A: alpha bundles	X: Glutamine synthetase-like	H: Glutamine synthetase/guanido kinase	T: Glutamine synthetase/guanido kinase	F: PGM_PMM_I	ECOD (develop294)
A	HSP90	e1vr4A1	A: alpha bundles	X: EGF-like	H: LDL receptor-like module	T: LDL receptor-like module	F: HSP90	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
E	3.30.110.70	Alpha Beta	2-Layer Sandwich	Translation Initiation Factor IF3	Hypothetical protein apc22750. Chain B	CATH (4.3.0)
D	3.30.110.70	Alpha Beta	2-Layer Sandwich	Translation Initiation Factor IF3	Hypothetical protein apc22750. Chain B	CATH (4.3.0)
C	3.30.110.70	Alpha Beta	2-Layer Sandwich	Translation Initiation Factor IF3	Hypothetical protein apc22750. Chain B	CATH (4.3.0)
B	3.30.110.70	Alpha Beta	2-Layer Sandwich	Translation Initiation Factor IF3	Hypothetical protein apc22750. Chain B	CATH (4.3.0)
A	3.30.110.70	Alpha Beta	2-Layer Sandwich	Translation Initiation Factor IF3	Hypothetical protein apc22750. Chain B	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E	PF01906	Putative heavy-metal-binding (YbjQ_1)	Putative heavy-metal-binding	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E	IPR002765	Uncharacterised protein family UPF0145, YbjQ-like	Family
A, B, C, D, E	IPR035439	UPF0145 domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.