Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth A]SCOP2B Superfamilyp53-like transcription factors 8040233 3000758 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilyE set domains 8054875 3000070 SCOP2B (2022-06-29)
D [auth B]SCOP2B Superfamilyp53-like transcription factors 8034184 3000758 SCOP2B (2022-06-29)
D [auth B]SCOP2B SuperfamilyE set domains 8054869 3000070 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth A]RHD_dimere1vkxA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: RHD_dimerECOD (1.6)
C [auth A]RHD_DNA_binde1vkxA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: RHD_DNA_bindECOD (1.6)
D [auth B]RHD_dimere1vkxB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: RHD_dimerECOD (1.6)
D [auth B]RHD_DNA_binde1vkxB2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: RHD_DNA_bindECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth A]PF16179Rel homology dimerisation domain (RHD_dimer)Rel homology dimerisation domainThe Rel homology domain (RHD) is composed of two structural domains, an N-terminal DNA_binding domain (Pfam:PF00554) and a C-terminal dimerisation domain. This is the dimerisation domain [1].Domain
C [auth A]PF00554Rel homology DNA-binding domain (RHD_DNA_bind)Rel homology DNA-binding domainProteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immu ...Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See Pfam:PF16179) that functions as a dimerisation domain [1-2].
Domain
D [auth B]PF16179Rel homology dimerisation domain (RHD_dimer)Rel homology dimerisation domainThe Rel homology domain (RHD) is composed of two structural domains, an N-terminal DNA_binding domain (Pfam:PF00554) and a C-terminal dimerisation domain. This is the dimerisation domain [1].Domain
D [auth B]PF00554Rel homology DNA-binding domain (RHD_DNA_bind)Rel homology DNA-binding domainProteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immu ...Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See Pfam:PF16179) that functions as a dimerisation domain [1-2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C]DNA (5'-D(*TP*GP*GP*GP*GP*AP*CP*TP*TP*TP*CP*C)-3')---
B [auth D]DNA (5'-D(*AP*GP*GP*AP*AP*AP*GP*TP*CP*CP*CP*C)-3')---
C [auth A]PROTEIN (NF-KAPPA B P65 SUBUNIT)
D [auth B]PROTEIN (NF-KAPPA B P50 SUBUNIT)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth A]IPR033926NFkappaB IPT domainDomain
C [auth A]IPR013783Immunoglobulin-like foldHomologous Superfamily
C [auth A]IPR011539Rel homology domain, DNA-binding domainDomain
C [auth A]IPR030495Transcription factor p65, RHD domain, N-terminalDomain
C [auth A]IPR002909IPT domainDomain
C [auth A]IPR030492Rel homology domain, conserved siteConserved Site
C [auth A]IPR014756Immunoglobulin E-setHomologous Superfamily
C [auth A]IPR037059Rel homology domain (RHD), DNA-binding domain superfamilyHomologous Superfamily
C [auth A]IPR008967p53-like transcription factor, DNA-binding domain superfamilyHomologous Superfamily
C [auth A]IPR000451NF-kappa-B/DorsalFamily
C [auth A]IPR032397Rel homology dimerisation domainDomain
D [auth B]IPR030503Nuclear factor NF-kappa-B, p105 subunit, Rel homology domain, N-terminalDomain
D [auth B]IPR002909IPT domainDomain
D [auth B]IPR030492Rel homology domain, conserved siteConserved Site
D [auth B]IPR033926NFkappaB IPT domainDomain
D [auth B]IPR014756Immunoglobulin E-setHomologous Superfamily
D [auth B]IPR002110Ankyrin repeatRepeat
D [auth B]IPR000488Death domainDomain
D [auth B]IPR013783Immunoglobulin-like foldHomologous Superfamily
D [auth B]IPR037059Rel homology domain (RHD), DNA-binding domain superfamilyHomologous Superfamily
D [auth B]IPR036770Ankyrin repeat-containing domain superfamilyHomologous Superfamily
D [auth B]IPR008967p53-like transcription factor, DNA-binding domain superfamilyHomologous Superfamily
D [auth B]IPR011539Rel homology domain, DNA-binding domainDomain
D [auth B]IPR011029Death-like domain superfamilyHomologous Superfamily
D [auth B]IPR000451NF-kappa-B/DorsalFamily
D [auth B]IPR047096Nuclear factor NF-kappa-B p105 subunit, death domainDomain
D [auth B]IPR032397Rel homology dimerisation domainDomain